| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1027 |
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| Symbol | |
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| ID | 8323091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1059265 |
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| End bp | 1060884 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952154 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003109638 |
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| Protein GI | 256371814 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0505944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGC ACGATCTCGA ACGCAACCTG ATTCAGCGCG TCAACGTCGG CGACATGCTC
ACGCGGAGCG CGTGGCGTCT CGGCGAGAAG GAGGCGGTGA TCGCGGGCGA CGAGCGACTG
ACCTACCGAG CGCTGAACGA CCGTGTGAAC GCATTCGCCC ATGCCCTCCT CGACGCGGGC
TATGGCAGGG GCACCGCACT CCTGCTCATC AGCGGCAACA GCATCGAGTT CCTCGTCACC
TACTACGCCT GCGCCAAGAC CGGCACCGTC TGCGTGCCCA TCAATCTGGC GTGGGGGCCC
AACGAGCTGG CCTACGTGCT CGGCCACGCC AGAGCCCGCG GCGCGGTGGT CGAGGCCCAG
TTCGTCCCCC TCATCTCCGG TGCGCTGGCG ATCGCCGAGC ACCACGACCT CGTCGACGTC
ATCGTCGCCC CTGGAACAGG GGCCGAGTGG GAACCAGCGC CACAGGGCAC CTGGCACACG
CTCGATGCCT TCGTCGACCC GAACGCAACC AGCGAGCCGG CCTGCTTCGT CGACGACCGA
GATCCGCTGA CCTACCTCTA CACGAGTGGC ACCACGTCGG CGCCCAAGGG TGTGGTCTCG
AGTCACGTCG CGGTCTACAT CGAGTCGCTC ACCGGTCCGA TCGTGATGCA CTACAGCGAC
GCCGACCGCA GTGCCGTCGT GATGCCACTG TTCCACACGG CGCAGCTGAA CGGCCTCACC
ACGGGCCTGC TCTACCTCGG CGGCACCGTC GTCCTGCACC GATCCTTCGA CGCTGCGGCT
CTGCTCGCGA GCATCGAGCG CGAACGGATC ACGCAGATCT TCCTCCTGCC GATGATGTAC
CGCGCGCTCA TCGATCACCC CGACGTCTCC CGCCGCGACC TCTCGAGCCT CCGACTCGGG
ATCTACGCCA TGGCGCCCAT GGCCGAGACC GACGTCAAGC GCGTGACGGA GGTGCTCGGC
TGCGACCTCG CCCTCGGCTT CGGCCAAACC GAGATGAATC CCCTCACCAC CGTGCTCCTC
CCGGAGCAAC AGCTCTCCCA CGCCGGTGCC GTGGGGGGCG CGGTGCCGAA CGTGCAGGTC
GCCATCGTGA ACGACGCCGG CGAGCTCGTG CCCGCTTACA CGCGTGGCGA GATCGTCTAT
CGCGGTCCTC ACGCGATGCA GGGCTATCTC CACGACGAGC AGGCGACGAA CGAGGCGTTC
GCCGGGGGAT GGTTCCACTC CGGCGACGTG GGTTACCTCG ATGCCGACGG GGTGCTGTGG
TTCGAGGATC GCCGCAAGGA CGTGATCAAG ACGGGCGGCG AGAACGTCGC ATCCCTCGAG
GTCGAGCGTG CACTCTACGG AGCTGAGCCG CGCATCGACG AGGTCGTCGT GGTGGGCCTG
CCGCACGCGC ACTGGACCGA GGCAGTCGTT GCGATCGTAC GGCCACGCCC CGGCTCAGGA
CTCACCGAGA CCGACGTCCT CGCCGCGGCC CGCAGCGCCC TCCCCGGCTT CAAGGTGCCA
AAGGCGGTGA TCCTCGTCGA CGAACTCCCA CGCACCGCCA CCGGCAAGGT CCAGAAGCAC
CTCCTTCGAA GCCAGTACCG CGACTACTTC GCCACCACGG CAGAATCCGA GCGGGCCTAG
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| Protein sequence | MTSHDLERNL IQRVNVGDML TRSAWRLGEK EAVIAGDERL TYRALNDRVN AFAHALLDAG
YGRGTALLLI SGNSIEFLVT YYACAKTGTV CVPINLAWGP NELAYVLGHA RARGAVVEAQ
FVPLISGALA IAEHHDLVDV IVAPGTGAEW EPAPQGTWHT LDAFVDPNAT SEPACFVDDR
DPLTYLYTSG TTSAPKGVVS SHVAVYIESL TGPIVMHYSD ADRSAVVMPL FHTAQLNGLT
TGLLYLGGTV VLHRSFDAAA LLASIERERI TQIFLLPMMY RALIDHPDVS RRDLSSLRLG
IYAMAPMAET DVKRVTEVLG CDLALGFGQT EMNPLTTVLL PEQQLSHAGA VGGAVPNVQV
AIVNDAGELV PAYTRGEIVY RGPHAMQGYL HDEQATNEAF AGGWFHSGDV GYLDADGVLW
FEDRRKDVIK TGGENVASLE VERALYGAEP RIDEVVVVGL PHAHWTEAVV AIVRPRPGSG
LTETDVLAAA RSALPGFKVP KAVILVDELP RTATGKVQKH LLRSQYRDYF ATTAESERA
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