| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1018 |
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| Symbol | |
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| ID | 8323082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1042229 |
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| End bp | 1043167 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952145 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003109629 |
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| Protein GI | 256371805 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.109872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCAGC AGGCAGAGTG GGCGATCGTC ACCGGCGGCT CGGGATTCAT CGGGACCGCG
GTCGCTCGTG CGCTTCGAGC GCGCGGCGTG CGGGTCGCGA TCGTCGATCG CAACGCGCCG
CAGCACCGCG AACTCGATGT GTTCGTCAAG GGCGCGATCG AGCACGAGCG CACCTGGCTC
GCCCTCGCGA CCGAGCTCGC TGGCGAGCAC GTCCGTGCGC TCTACCACTT CGCGGCCCGC
ACCAGCGTCT TGCAGTCGGT GAACGACCCT CACGACGTCT TTGTGTCCAA CCTGGTGGGC
TACGAGAACG CGCTCGAGTT CGCGCGCACG CACGAGGTCG CGAGCGTCCT CTTCGCGTCG
ACCAACGCGG TCGTGGGTGC GGGTGACAGC GGCACCATCT CGGAGCGCTC GCCGTTGGCG
CCACTCACGC CCTATGGCGC GACGAAGGCG GCAGGGGAGA TGCTCGGGAG CGCGTACGCC
GCTAGCTACG GCATCCACGT CGCGTCGGTG CGCCTGACGA ACGTCTACGG TCCGGGGATG
TGGCACAAGG ACTCGATCGT GCCGCGCCTC CTGCGTCATG TGGTCGGCCT GTCTGAGGCG
ACCATCTACG GAGACGGTGA GCAGGTGCGT GACTTCGTCT ACATCGGTGA CGTCGTGGAC
GCCTTCGTGC GCCTCGAGGA GCTCGGCTTC GTGGGCGCGG TCTCGTTCGG TTCCGGCACG
AGCGTCAGCG TGAATGAGCT GGTCGATCTC GTCGGCGACG TCACGGGCCA CGAGCTGCGC
CTGCGTCATG TGCCTGCGAA GGCTGGTGAG ATGCCGGGCG TGAGCGTGGA CCTGTCGCTC
GCGCGCTCGC TCGGCCTGAA GGCTGACGTC GAACTGGCGG AGGGTCTGCA GTTCGCGTGG
TCGGACTTCC AGGAGGATCA GGGCCGCGTC GCCGGCTGA
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| Protein sequence | MRQQAEWAIV TGGSGFIGTA VARALRARGV RVAIVDRNAP QHRELDVFVK GAIEHERTWL
ALATELAGEH VRALYHFAAR TSVLQSVNDP HDVFVSNLVG YENALEFART HEVASVLFAS
TNAVVGAGDS GTISERSPLA PLTPYGATKA AGEMLGSAYA ASYGIHVASV RLTNVYGPGM
WHKDSIVPRL LRHVVGLSEA TIYGDGEQVR DFVYIGDVVD AFVRLEELGF VGAVSFGSGT
SVSVNELVDL VGDVTGHELR LRHVPAKAGE MPGVSVDLSL ARSLGLKADV ELAEGLQFAW
SDFQEDQGRV AG
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