| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0994 |
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| Symbol | |
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| ID | 8323058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1016522 |
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| End bp | 1017571 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952121 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003109605 |
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| Protein GI | 256371781 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGGT CTCTTCGGAC CTGGCGTCGG CCAGCCGTCG TCGGCGCGGT GCTCGCTGGC
GCATCGCTCC TGGCTGCCGC GTGTGGATCC ACGTCGTCGT CCTCGTCCAC GACGTCGTCG
TCCACGACGG CCTCGAGCAG CGGCACCACC ATCGGTTTCG TCGTCGGCGC AGAAGCCGAT
CCGTTCTTCC AGTCGATGTA CGTCGGCGCG GCCGCCGAAG CCAAGGCGCT CGGCGTGAAG
CTCGTCTGGC AGGGCGACCC GGTCGACTAC TCGCCAGCGA CGCAGATCCC GATCCTGCAG
CAGGTCCTCG CGCTGCATCC GAACGCCATC GTGGTCGCGC CCACCGATCC GAAGGCCTTG
AACACCTACA TGCAAGAGGC CGTCAAGGAA GGTATCAAGG TCCTCAACGT CGACTCCGGA
TCGTCGGACC AGAGCATGAT CACCTCCTGG GTCACCGGTG ACAACTACCA AGGTGGCGAG
ACGGCGGCCC AAGCACTGGC CTCCGCCATG GACTACGCAA AGAACTGCAC CGCGTCCAAC
CCGTGCACGG TTGCGGTCGG CGTCTCGTCG CTGACCACCA CCACCGACGC CCAACGCGTC
GCGGGCTTCA AGGCCGAGAT CAAGGCGCAC TACCCGAACA TCCAGGTGCT CAATGACGTC
GTGAGCGAGT CGGAGCCGAG CGTCGCGCAG TCTGGGTTCG CCCAGGACAT CAGCGCCCAC
CACCTCGACG GCATCTTCGC GGTGGATGGC ACGGATGCAG AAGGTGCGAG CGCAGCTGTC
AAGGCGGCCG GCGCCGAAGG CGCGAACGTG AAGATCGTGG GCTACGACGC CTACGCGACC
AACATCCAGT CGATGGAGGC GGGCGGACAG GGGTCGCTCT CGGCGATCAT CTCCCAGCAG
CCGACCCTCG AGGGCAAGCT GATCATCGAG TACGCCGTGG ACGCACTGCA CCACAAGCCG
GTGCCCCACC TGCAGCTCAT CCCGAACATC TTGCTCACGC CCTCGACACC ACAGAGCATC
CTCCAGAAGT ACCAGTACGT CCAGAGCTAG
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| Protein sequence | MTRSLRTWRR PAVVGAVLAG ASLLAAACGS TSSSSSTTSS STTASSSGTT IGFVVGAEAD
PFFQSMYVGA AAEAKALGVK LVWQGDPVDY SPATQIPILQ QVLALHPNAI VVAPTDPKAL
NTYMQEAVKE GIKVLNVDSG SSDQSMITSW VTGDNYQGGE TAAQALASAM DYAKNCTASN
PCTVAVGVSS LTTTTDAQRV AGFKAEIKAH YPNIQVLNDV VSESEPSVAQ SGFAQDISAH
HLDGIFAVDG TDAEGASAAV KAAGAEGANV KIVGYDAYAT NIQSMEAGGQ GSLSAIISQQ
PTLEGKLIIE YAVDALHHKP VPHLQLIPNI LLTPSTPQSI LQKYQYVQS
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