| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0985 |
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| Symbol | |
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| ID | 8323049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1005265 |
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| End bp | 1006026 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952113 |
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| Product | CRISPR-associated protein Cas5 family |
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| Protein accession | YP_003109597 |
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| Protein GI | 256371773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGC TCGCACTGCG CCTTGGAGGA CCATTGCAGG CCTGGGGCAG CAGCCAGCGT
CTCGACCACT ACCGACGAAC GGAGCGTTTC CCAACTAAGT CAGGGGTCAT CGGGCTGCTC
GCAGCCGCCC TGGGGCGTCC TCGGTCCGCA GCTCTCGACG ATCTCGGCGC GCTGCGCTTC
GCCGTGCGCA TCGATCGACC AGGTGAAGTC TTGCGAGACT TCCACACACT GTCGAGTCTG
TTCGACGACA AGAAGCGGTT CGCGCCCGGC GAGGGGAGAC TGCCGACTGC ATCGGGCGGC
TATCGCTCTG CCGCTACGAG CACGCAAGTC ACCGAACGGT TCTACCTCGC CGACGCCTGC
TTCGTCGCTG GGCTCGAAGG CGACGCCGCG CAGCTCCAAG AGCTCGACGA CGCACTCAGG
ACTCCGGTGT TTCCCCTGTA CCTCGGGCGA CGCTCCTGCC CCCCGGACAA GCCGCTGCGG
CTCGGCGTCT ACGACGGCGG GCTCATCGAC GTGCTGGCAA GCATCCCGTG GCAGGCCAAC
GACCCCGCGC AGTCCGCGAC GTCGATACGG TGTGAACTCG TCGTCGAGAA TCCCGCCGGC
GATGTCGAGC TTGCGGACCA GGCACGAAGC TTCGACCCAC TCACGCGCTC CTACACGCGC
CGCCGGGTCA GTCATCACTA CGTCGAGGTG ACCATCGGCC ACGGCCACGA ATCGGCTCGC
TCGACCCATG ACCCGATGGC CCTGCTCGAG GAGGGCGATT GA
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| Protein sequence | MSVLALRLGG PLQAWGSSQR LDHYRRTERF PTKSGVIGLL AAALGRPRSA ALDDLGALRF
AVRIDRPGEV LRDFHTLSSL FDDKKRFAPG EGRLPTASGG YRSAATSTQV TERFYLADAC
FVAGLEGDAA QLQELDDALR TPVFPLYLGR RSCPPDKPLR LGVYDGGLID VLASIPWQAN
DPAQSATSIR CELVVENPAG DVELADQARS FDPLTRSYTR RRVSHHYVEV TIGHGHESAR
STHDPMALLE EGD
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