| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0947 |
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| Symbol | |
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| ID | 8323011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 966917 |
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| End bp | 969082 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952075 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003109559 |
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| Protein GI | 256371735 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.452547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACG AGCGGTGGTT AGCGGAGCGC TACGCCGACA ACCCGCTCGT GCTCGACGCC
CTCGCGCTCG CGACGAAGGC GCACCACGGC CAGCTGCGCC GGTCTGGGGA GCCCTACATC
GTGCATCCCC TCGCGGTGGC CCGTCGCGTC GCCGAACTGC GCGCCGACCC GATCACCGTC
GCCGCGGCCT TGCTCCACGA CACGGTGGAG GATACCTCGA TCTCCCTGGA GGAACTCGAG
CAGCGTTTCG GCGCGGAGGT TGCCGCACTC GTAGACGGAG CGACGAAGCT CGACCGGCTC
TCGTTCGACT CCAAGGAGGT CGCGCAAGCC GCCACGATGC GCAAGATGCT CATCGCGATG
GCGCGTGACG TGCGCGTGTT GGTGATCAAG CTCGCCGATC GCCTGCACAA CATGCAGACG
ATCGGCGCTC TCGGGCGCGA GAAGCAGCGC CGGATCGCGC ACGAGACCAT GGACATCTAT
GCGCCACTCG CCCATCGCCT CGGCATCGAG GAGGTGAAGT GGCAGCTCGA GGATCATGCG
TTCGCGGTCC TGCATCCTCG GCGCTACGCC GAGATGGAGC ACCTCGTCAG TCAGCGGGCT
CCGGAGCGCG AGGCGCGGCT CCAGGCGGTC AGCGAACAGC TCGCTGCCAA GCTCGCCCAA
GTCGGGATCG TCGCCGAGGT CACGGCGCGC CCCAAGCACG TCTGGAGCAT CTACGAGAAG
ATGGTGCTGC GGGGCAAGGA GTTCGACGCG ATCTACGACA TCCTCGGGGT CCGCATCATC
ACACACGAGG AGCGTGACTG CTGGGCAGCG CTTGGCGTCA TCCACTCGCT GTGGGCGCCG
ATCCCCGGGC GGTTCAAGGA CTACATCAAC GCTCCGAAGT TCAACCTCTA CCAGTCGCTC
CACACCACCG TCGTCCTCGA GGGCGGGAGC CCGCTCGAGG TCCAGGTGCG CACCCGTGAG
ATGCATCTGC GCGCCGAGTA TGGCGTCGCC GCTCACTGGG GCTACAAGGA GGGTTCTGAT
GCGGCCGAGC TCGCCTGGCT CGGTCGGCTC ATCGACCTCG ACGAAGAGAC GCACGATCCG
GTCGAGTTCC TCGAGCACCT CAAGCTCGAT CTCGGGACCG ACGAGATCTA CGTGTTCACG
CCCAAGGGCA AGGTCATCAC CCTCCCGACG GGCGCGACGC CGCTCGACTT CGCCTATGCC
ATCCATACCG AGGTGGGGCA CCGGTGCGTC GGTGCCAAGG TGAACGGTCG GCTGGTCGCG
CTCGAGACGG AGCTGCGCTC GGGCGACACC GTCGAGGTGG TGACGAGTCG CTCCGCCACG
GCGGGTCCGT CGCGTGACTG GCTCGCGATC GTGCGCACCC CGAGGGCGCG CTCGAAGATC
CGCCAGTGGT TCTCGCGAGA GCGTCGGGAG GAGTCGATCG ACGCAGGTCG CGAGGAGCTC
GCTCGTGAGC TGCGTCGCGA GGGGTTGTCG GTGACCAAGC ACCTCTCGGG ACCGGGTCTT
GCGCGCCTGG CCGAGCAGGC CGGCTATCGA GAGGCCGAGA CCCTGCTCGC GGCCATCGGT
GAGGGCCACG TCTCGGCCCG GAGCGTGCTC GCCAAGGTGC AGCGAGCCGA GCTCGAGCAC
GACGGGTTCG AGCCGGCGGT CGCGACGCCG CAGCGGCGGC GCCGTGGAGG CGGGGGACCG
TCGATCTGGG TCGAGGGTCT CGACGACGTG CTCGTGCGGC TCGCACGCTG CTGCAACCCG
CTGCCGGGCG ATGCGATCGT CGGCTTCATC ACCCAGGGCC GTGGGGTCGC CATCCACCGA
GAGGACTGCC CGAACGTCGA GGCGTTGCTC GCCCAAGGGC CCGAGCGCAT GGTCGAGGTC
GACTGGGCGG GTGAGCACGG CTCCGGCTTC CAGATGGCGA TCGAGATCGA AGCCCTCGAC
CGGCCGCGTC TGCTCGCCGA CGTGTCCCGT GTGCTCGCCG AGCACCACGT GAACATTCTC
GCCTCCTCGT CGGGGCGCGG GAGTGATCTT GTCGCGGCGA TGCGTTTCGA GTTCGAGCTC
GCCGATCCGA GCCACCTGTC GTCGATCCTG GCGGGCATTC GCCAGCTCGA CGGTGTCTTC
AACGCTGCCC GAGTCGTTCC CGGGCGACGT CGCCCACGGA CCGCGACCCA GCACGACGGC
CGCTGA
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| Protein sequence | MLDERWLAER YADNPLVLDA LALATKAHHG QLRRSGEPYI VHPLAVARRV AELRADPITV
AAALLHDTVE DTSISLEELE QRFGAEVAAL VDGATKLDRL SFDSKEVAQA ATMRKMLIAM
ARDVRVLVIK LADRLHNMQT IGALGREKQR RIAHETMDIY APLAHRLGIE EVKWQLEDHA
FAVLHPRRYA EMEHLVSQRA PEREARLQAV SEQLAAKLAQ VGIVAEVTAR PKHVWSIYEK
MVLRGKEFDA IYDILGVRII THEERDCWAA LGVIHSLWAP IPGRFKDYIN APKFNLYQSL
HTTVVLEGGS PLEVQVRTRE MHLRAEYGVA AHWGYKEGSD AAELAWLGRL IDLDEETHDP
VEFLEHLKLD LGTDEIYVFT PKGKVITLPT GATPLDFAYA IHTEVGHRCV GAKVNGRLVA
LETELRSGDT VEVVTSRSAT AGPSRDWLAI VRTPRARSKI RQWFSRERRE ESIDAGREEL
ARELRREGLS VTKHLSGPGL ARLAEQAGYR EAETLLAAIG EGHVSARSVL AKVQRAELEH
DGFEPAVATP QRRRRGGGGP SIWVEGLDDV LVRLARCCNP LPGDAIVGFI TQGRGVAIHR
EDCPNVEALL AQGPERMVEV DWAGEHGSGF QMAIEIEALD RPRLLADVSR VLAEHHVNIL
ASSSGRGSDL VAAMRFEFEL ADPSHLSSIL AGIRQLDGVF NAARVVPGRR RPRTATQHDG
R
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