| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0918 |
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| Symbol | |
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| ID | 8322982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 936851 |
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| End bp | 939298 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952052 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003109536 |
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| Protein GI | 256371712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGGT TCCAGGACGA GGCCCTCGAG GCGCTCGACG AAGGGTCTTC CGTCCTCGTC
AGCGCTCCCA CCGGTTCCGG CAAGACCATC GTCGCGCTCT ATGGCATGGC CCAGGCCCTT
CGACAGGGAC GGCGAGCCTT CTACACGTCC CCGCTCAAGG CGCTGTCCAA CCAGAAGTAC
CACGAGCTCG CCCGTTTCTT CGGTCCTCAG CACGTCGGGT TGCTCACTGG GGACACCACG
CTGAACCCGG ACGCGCCTGC CGTCGTGATG ACGACCGAGG TGCTGCGGAA CATGATCTAC
GCCTCGCCAG CCGCGATCGA CGACGTCGAC GTCGTGGTGC TCGACGAGGT CCACTACCTC
CAGAACCCGT ACCGGGGATC GGTGTGGGAG GAGGTCATCA TCCACTTGCC GCGCCGCGTC
CGCCTCGTCT CGTTGTCGGC GACGGTGTCG AACGTGGCGG AGTTCGCTGG CTGGTTGGCC
GCCGTTCGAG GTACGACGCG CGTCGTGGAG GCGACCCACC GCCCCGTCCC GCTCGAGCAT
CGCTACCTCT ACACGCCGCG GCGTTCGGAG ACGCCGGTCG CGATACCGGT CCTCGTCGGT
GGGAGGGAGA ACCCCCAGGG GGCACAGCTC GATCCACCCT GGCTCGCGCG CAGTCGTTAC
CGAGACGGGC TTCGGGCTCG GACGGTCCAT CGGATCGAGC TCGTCGAGTT CCTCGCTCAC
GAGGGCGATC TGCCTGCCAT CGTGTTCATC TTCTCCCGTG CTGGGTGCGA GCGCGCCCGC
GATGAGGTGG TCGCCTCCGG CATTCGACTC ACCACCGCGG CCGAGCGGGT CGCGATCAGG
CGCATCGTCG ACGAGCGTCT CGACGGGTTG GCCGAGCGCG ACCTCGCGGC CGTCGGGTTC
GCGCCGTTCC TCGCGGGACT CGAGGCGGGC ATCGCGCCCC ACCACGCGGG CATGATCCCG
CCGTTTCGCG AGGTCGTCGA GGCGTGCTTC GAGCGCGCGC TCGTCAAGGT GGTGTTCGCG
ACCGAGACGC TCTCGCTGGG GATCAACATG CCGGCCCGAT CGGTCGTCAT CGAGCGCCTG
GTCAAGTTCG ACGGGGAGTC CCACCAGCTG CTCAAGCCCG GCGAATACAC GCAGTTCGCT
GGACGGGCAG GGCGTCGGGG GATCGACGAG CGCGGCACCA GCTACGTCGT GTGGGGTCCG
CAGGTCGCCT TCAGCGACGT CGCGCACGTC GTCCGGGCGG ACTTCTACCC GATCACGAGT
TCGTTCCGTC CCACCTACAA CATGGCGGCG AACCTCGTGA AGCGCTACAC GCCCGAGCGC
GCAGCTGAGC TGCTCGATCT CTCATTCGCG CAGTACCAGC GAGACGCCGA GGTCGTCCGG
CGCCAGGCGC GGTTGCGAGC AGGCAACGAG GATGTCGTCG CGGCGACGAC GCAGCCGGAG
CGCGCTGAGT GGATCGAGCC GGGTCGGGTG GTGAGCGTCC CGAGCGAGCG CGGCGGTGCC
GAGCGAGCGC TGCTGCTCAT CACGCGGGTG TCCCAGCGGC GCGGTGGCGG GCTTCGGATC
AGTGCGTCCT CGGAGTCGGG CAGGGTGTAT CGCCTCGACG AGGGGCACGT CGCCTCGATG
CGACCCAAGG GCAAGGTGCG CCTCCGTGCG GTGCACGGCT CCCGGGACCA GGGGATCGCC
ATGGCCTGGG CACGGATCCG GGCGCGGCGT CAGCAGGCGC GGGAGCTCGG CGAACCGTCG
AAGGCATTCC TCGACGAGCG TGCGCGTGGT CGTCGCACCG ACGCGCCAGC GCCGTCGCCC
CGTTCGCGTG AGTTGCTCTC GGAACAGCTC GAGCGTGTGC GCACGGTGCT CGAGCGCTTC
GGCTTCGCCG AGGGGTGGAG CCTGACGCAG CGAGGCGAGC GACTGACGAA GGTCTACGTC
GAGACGGACC TCGCGGTCGT CAGGTTCCTC CACGACGCCG AGATCGACGG CGTCGGCCCG
GCGGAGTTCG CCGCGATCGC CTCGTGGTTC GTGTTCGAAC CACGACCTCA TTCGCCCCGA
TCCGGTCCGT GGCCAGCGAG CGCGGCCATG GCGCGGCTCT ACGAGCGGGC CGAGGCGCTC
ATGCAGGAGC AGTGGGCGGC GGAGTCGTCG CTCAGACTGC CTCGATCGCG CGGTCCAGAG
CCCGGGATCT CTCGCGCCCT CTGGCGGTGG GCGCGGGGAG AGCCGCTGGG GGCAGTGCTC
GCGACCGACG AGATGGCACC AGGGGACTTT GTTCGCGTGG TCAAACAGGT CGCGGACTTG
CTTCGCCAGA TCGCGGTCGC CTGGGACGAC GATGTGGTCT CGTCGCTCGC TCGGCGAGCC
GAGGCGGCGG TCGTTCGCGG CGTGGTGGCG CTGTCGTCGG AGGTCGTCGC CGAGGATCCC
GAGCGCATGC CCCACGGAGT GCTCGAGCTC GACGAGCGGC CGGCGTAG
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| Protein sequence | MDRFQDEALE ALDEGSSVLV SAPTGSGKTI VALYGMAQAL RQGRRAFYTS PLKALSNQKY
HELARFFGPQ HVGLLTGDTT LNPDAPAVVM TTEVLRNMIY ASPAAIDDVD VVVLDEVHYL
QNPYRGSVWE EVIIHLPRRV RLVSLSATVS NVAEFAGWLA AVRGTTRVVE ATHRPVPLEH
RYLYTPRRSE TPVAIPVLVG GRENPQGAQL DPPWLARSRY RDGLRARTVH RIELVEFLAH
EGDLPAIVFI FSRAGCERAR DEVVASGIRL TTAAERVAIR RIVDERLDGL AERDLAAVGF
APFLAGLEAG IAPHHAGMIP PFREVVEACF ERALVKVVFA TETLSLGINM PARSVVIERL
VKFDGESHQL LKPGEYTQFA GRAGRRGIDE RGTSYVVWGP QVAFSDVAHV VRADFYPITS
SFRPTYNMAA NLVKRYTPER AAELLDLSFA QYQRDAEVVR RQARLRAGNE DVVAATTQPE
RAEWIEPGRV VSVPSERGGA ERALLLITRV SQRRGGGLRI SASSESGRVY RLDEGHVASM
RPKGKVRLRA VHGSRDQGIA MAWARIRARR QQARELGEPS KAFLDERARG RRTDAPAPSP
RSRELLSEQL ERVRTVLERF GFAEGWSLTQ RGERLTKVYV ETDLAVVRFL HDAEIDGVGP
AEFAAIASWF VFEPRPHSPR SGPWPASAAM ARLYERAEAL MQEQWAAESS LRLPRSRGPE
PGISRALWRW ARGEPLGAVL ATDEMAPGDF VRVVKQVADL LRQIAVAWDD DVVSSLARRA
EAAVVRGVVA LSSEVVAEDP ERMPHGVLEL DERPA
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