Gene Afer_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0915 
Symbol 
ID8322979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp934656 
End bp935627 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID644952049 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003109533 
Protein GI256371709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.229161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCTCGG GCGTGCAGCC CACCGGCGTG GGTCATCTCG GCACGCTGCT GGGTGCGTTC 
ATGAACTTTC TCGCCGACCA GGAGCGGGCG GAGTGCATCT TCCTCGTCGC GGATCTGCAC 
AGCCTCACCG TCGACCAGGA CCCTGCGGCG CTTCGGCGCC AGCGTTACGA GCTGGTGGCG 
ACCTTCCTTG CGGTGGGCAT CGACCCTTTG AAGTCGACCA TCGTGATGCA GAGTGAGGTG 
CCCGAGCATG CCGAACTCGC CTGGGTGATG GAGTCGACCG CGACCTATGG CGAGCTCGCA 
CGGATGACGC AGTTCAAGGA CAAGTCCGCT CGCCAGACGA AGGTGCGCGC GTCGCTGTTC 
ACCTACCCCG CGCTGATGGC GGCGGACATC TTGCTCTATC AGGCCGATGT CGTGCCGGTG 
GGCGAGGACC AGCTCCAGCA TCTCGAGCTG ACGCGGACCC TCGCCGAGCG CTTCAACGGC 
GCCTATGGCC CGACCTTCAC GGTTCCGAAG GGTCAGCTTC CGACCCATGC CGCACGCGTG 
ATGGACCTCG CCGAGCCGAC GTCGAAGATG AGCAAGTCCT CCTCCTCGCA AGCGGGCATC 
GTGTTCCTGA CCGACGACGA CGCGACGATT CGGCGCAAGT TCCTCCGCGC TCGTACGGAT 
TCGTTCGCCG AGGTCGTCTG GAAGCCAGAC GACCCGTCCC GTGCCGGTGT GACCAACCTC 
GTCGAGATCC TCGCCGCGCT CGAGGGCACC GACGCATCCA GCGTCGCTGC TCGCTTCGAT 
CGCTACGGAC CGTTGAAGGA AGCGGTCGCG GAGGCGGCGG TGGCCGCCAT CGCCCCGGTG 
AGAGAGCGCT TCATGGCCCT GCGCGACGAC GAGGCGACCC TGCGGGGCGT GCTCGACCAG 
GGGCGTGAGC GCGCCCGGGA CATCGCCCGC ACGACGATGG CCGTGGTGCG CGATCGCCTG 
GGCCTGACCT GA
 
Protein sequence
MLSGVQPTGV GHLGTLLGAF MNFLADQERA ECIFLVADLH SLTVDQDPAA LRRQRYELVA 
TFLAVGIDPL KSTIVMQSEV PEHAELAWVM ESTATYGELA RMTQFKDKSA RQTKVRASLF 
TYPALMAADI LLYQADVVPV GEDQLQHLEL TRTLAERFNG AYGPTFTVPK GQLPTHAARV 
MDLAEPTSKM SKSSSSQAGI VFLTDDDATI RRKFLRARTD SFAEVVWKPD DPSRAGVTNL 
VEILAALEGT DASSVAARFD RYGPLKEAVA EAAVAAIAPV RERFMALRDD EATLRGVLDQ 
GRERARDIAR TTMAVVRDRL GLT