Gene Afer_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0913 
Symbol 
ID8322977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp933606 
End bp934136 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID644952047 
Productsignal peptidase I 
Protein accessionYP_003109531 
Protein GI256371707 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0872445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC GTCGCCGAGC GGGCTGGCTC GCACTGGCGC TCCTCGTCGT GGCGGCCGTG 
CTGGCGGTGC GCGCATGGGT GCTCACGCCG TTCGTCGTCC CCACCGGTTC GATGCGACCG 
ACCATCCGTC CCGGGTCGTG GATCCTCGTC GATCGACTCG CCTTCGACAC ACACCCCATC 
GAGGTCGGTG ACGTCGTGGT GCTTCGGCGA CCGGCCGACG ATCCGGGGGA GGCGAACTCG 
GACTACCTCG TCAAGCGGGT GATCGGCCTG CCCGGTCAGA CGATCGCCAG CCGCGGGGGG 
CACGTCGTGG TCGACGGACG GGTCCTCGCG GAGCCCTATC TGCCTCGCGG CGATCGGACG 
GAGGGCATCG TGCCCCAGAC GATCCCGCGG GGCGAATACT TCGTGCTCGG TGACGATCGC 
GGCGATTCGG TGGATTCGCG CATCTTTGGA CCCGTGCCAG CCTCCAGCAT CGTGGGCGAG 
GTCGTCGCGG TGGTATGGCC GCCGAGCCAA GCACACGTCG TTCGGTCGTA G
 
Protein sequence
MARRRRAGWL ALALLVVAAV LAVRAWVLTP FVVPTGSMRP TIRPGSWILV DRLAFDTHPI 
EVGDVVVLRR PADDPGEANS DYLVKRVIGL PGQTIASRGG HVVVDGRVLA EPYLPRGDRT 
EGIVPQTIPR GEYFVLGDDR GDSVDSRIFG PVPASSIVGE VVAVVWPPSQ AHVVRS