| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0907 |
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| Symbol | |
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| ID | 8322971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 927175 |
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| End bp | 928914 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952041 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_003109525 |
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| Protein GI | 256371701 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.205473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCG ATGAGACCCC GGAACGTGAG CACGCTGAGC AGCAGTCCCG CCAAGCGCTC
GAGGAGGAGG TGCGCGAACT CCGCCGACGT GTCGAGGAGG CACCGAGTCG AGTTCGTGCC
CTGGAGGAGA AGCTCCTCGA GGTGTCGGGA GCGTTGGCTC AGACCCAGGC GAAGAACGAG
AAGCTGACCT TCACGCTGCA GCAGGCACGA GAGCACATCC AGAACCTGAG GGAAGAGGTC
GAGAAGCTGA CGCAGCCCCC GTCTGCGTAC GGCGTCTACC TGGCGGCCAA CCAGGATGGT
ACGGCGGATG TCTTCACCAC GGGCCGCAAG ATGCGCGTGG CCGTGCACCC CGAGATCGAC
CTGGCAGCGG TTCGCGTCGG TCAGGAAGTC GTCCTCAACG AGTCGTTCGC CATCGTGTCG
GTGCGGGGGA GCGACGTGAT CGGAGAGGTG GCGACGGTCA AGGATGTGCT CGACGACGGG
AGTCGTGTGA TCCTGCTCGG ACGGGCGGAC GAGGAGCGGG TGGCGCAGGT CGCTGGTCAT
CTGCAGCACC CGCCGCTGCG CGTCGGTGAT TCGGTCATGG TGGATCCGCG TTCGGCGATG
GTGCTCGAGC GACTGCCACG GCCCGAGGTC AGCGAACTCG CGCTCGAAGA GGTCCCTGAC
ATCACCTATC ACGACATCGG TGGGCTCGAT CGGCAGATCG AGGAGATCCA GGACGCCGTC
GAGTTGCCGT TCCTCTACCG CGAGCTGTTC GGCGACTATC GGCTCCCCGC CCCCAAGGGC
ATCCTCCTCT ATGGCCCCCC AGGGTGCGGC AAGACGCTGA TCGCCAAGGC GGTCGCCAAC
TCGCTCGCCA AGAAGGTCGA GCAGGTCTCG GGCCGGAGCG TGCGAAGCTA CTTCTTGAAC
GTGAAGGGTC CCGAGCTCCT CAACAAGTAC GTCGGTGAGA CCGAGCGCCA GATCCGGTTG
ATCTTCCAAC GCGCACGCGA GAAGGCCGAG GAAGGCGTTC CGGTCATCGT GTTCTTCGAC
GAGATGGACT CGCTGTTTCG CACACGAGGC TCCGGCATCA GCTCCGACAT GGAGTCGACG
GTGGTTCCCC AGCTGCTCGC GGAGATCGAC GGCGTCGAAG CCTTGCGCAA CGTGATCGTG
ATCGGCGCGT CCAACCGAGA GGATCTCATC GATCCGGCGA TCTTGCGCCC GGGTCGTCTC
GACGTGAAGA TCAAGATCGA GCGGCCCGAC GAGCAGGCCG CACGCGAGAT CTTCGCGCGC
TATCTCACGC CGGAGGTCCC GATCGATGCG GGCGAGGTCA CGACCCTCGG CGGTGGCGAT
GCGGAGAAGG CCATCGCGGT GATGATCGAG CGGACCGTCG AGCGCATGTA CGCCACATCG
GACGAGAACC GCTTCCTCGA GGTCACCTAC CAGAACGGCG AGAAGGAGAT CCTCTACTTC
AAGGACTTCT CGTCGGGTGC GATGATCGAG AACATCGTGC GACGGGCGAA GAAGCTCGCC
ATCAAGCGCG AGATCGCGGG CGGGTCGCGG GGCATCTGCC TCGATGACCT CCTCGCCTCC
ATCGCGAAGG AGTTCAAGGA GCACGAGGAT CTCCCCAACA CGACCAATCC CGATGACTGG
GCGAAGATCT CCGGGCGCAA GGGCGAGCGG ATCGTGTTCA TGCGGATCCT CCTCCACGAG
GAGGAGGGAC AGACGGGTGG GCGCGCCATC GAGCGCGTCG CGACCGGTCA GTACCTGTAG
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| Protein sequence | MPRDETPERE HAEQQSRQAL EEEVRELRRR VEEAPSRVRA LEEKLLEVSG ALAQTQAKNE
KLTFTLQQAR EHIQNLREEV EKLTQPPSAY GVYLAANQDG TADVFTTGRK MRVAVHPEID
LAAVRVGQEV VLNESFAIVS VRGSDVIGEV ATVKDVLDDG SRVILLGRAD EERVAQVAGH
LQHPPLRVGD SVMVDPRSAM VLERLPRPEV SELALEEVPD ITYHDIGGLD RQIEEIQDAV
ELPFLYRELF GDYRLPAPKG ILLYGPPGCG KTLIAKAVAN SLAKKVEQVS GRSVRSYFLN
VKGPELLNKY VGETERQIRL IFQRAREKAE EGVPVIVFFD EMDSLFRTRG SGISSDMEST
VVPQLLAEID GVEALRNVIV IGASNREDLI DPAILRPGRL DVKIKIERPD EQAAREIFAR
YLTPEVPIDA GEVTTLGGGD AEKAIAVMIE RTVERMYATS DENRFLEVTY QNGEKEILYF
KDFSSGAMIE NIVRRAKKLA IKREIAGGSR GICLDDLLAS IAKEFKEHED LPNTTNPDDW
AKISGRKGER IVFMRILLHE EEGQTGGRAI ERVATGQYL
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