Gene Afer_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0899 
Symbol 
ID8322963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp920802 
End bp921824 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID644952033 
Producthypothetical protein 
Protein accessionYP_003109517 
Protein GI256371693 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.114072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCG ACCACCACCG CAACCAGGTA CCGGCGGTCG CGGGACGTGA CAGTGACCTC 
AAGCAGCTCC TCCTCGATGA GGCGCTCGCG GCCACCGAAG CGCCCCTCGA CCGACTCGAC 
CTCAAGATGC TGACCTCAGC GCTCCGCGAA CTCCGGAGCG CATTCGAGAC GTTCGGCCCG 
TTTCGAACCC AGCGCAAGGT GACGGTCTTC GGCTCGGCTC GCACCCACCC TGACGAGCCG 
AGCTACCAGC TCGCCGAGAC GCTCGGCGCC CGCCTTGCTC AGGCTGGCTG GATGGTCATC 
ACCGGGGGCG GCCCAGGCAT CATGGAGGCG GCGGCGCGCG GCGCAGGACC TCATCACGCC 
TTCGGGATCA ACATCCGCCT TCCCCTCGAA CAACCAGGCG ATCACGAACT CGCCGAACAC 
GGCCGACTGT TGGAGATGAA GTACTTCTTC ACTCGCAAGG TACTCATGGT GCGCGAGTCC 
GATGCCTTCA TCTCCCTCCC CGGCGGGCTC GGCACCTTGG ACGAGACGTT CGAGCTCCTC 
ACGCTCATGC AGACAGGCAA GACGCAGATC GCCCCTCTGA TCCTGCTCGA GCCCGCTGGA 
TCCCACTACT GGGACGGCGT GTGGCAGCTG CTCAACGATC GCATCGTCGA CCGGGGGCTT 
GCCGACCGCG ACGATCTCAC GCTGCTTCAC CGCTCGGACG ACATCGACGA CGCCCTGGCC 
GAGGTGTTCG GCTTCTATCG AGTCTTCCAC TCGCTCCGCG TCGTCGGCCG AGACCTCATC 
CTCAGACTGA ACGGGAGACT CTCCCCCGCG CGCGTCGCCG ACCTCGAGGT CGCCTTCGGC 
GACATCACCA CCGACGGTCG CATCCGAAGC GTCCGCGCGA CGCCGTGGGA GGTGCGAGAG 
CACGACCATC CGGATCTCCC GCGCCTCGCC CTCCGCTTCG ACCGGCGCTC GTTCGGACGC 
CTGCGCCAAC TCATCGATGC CGTCAACGCC AGCGAGATGG AGGCCGTCCG ACCCTCGGTC 
TAA
 
Protein sequence
MTSDHHRNQV PAVAGRDSDL KQLLLDEALA ATEAPLDRLD LKMLTSALRE LRSAFETFGP 
FRTQRKVTVF GSARTHPDEP SYQLAETLGA RLAQAGWMVI TGGGPGIMEA AARGAGPHHA 
FGINIRLPLE QPGDHELAEH GRLLEMKYFF TRKVLMVRES DAFISLPGGL GTLDETFELL 
TLMQTGKTQI APLILLEPAG SHYWDGVWQL LNDRIVDRGL ADRDDLTLLH RSDDIDDALA 
EVFGFYRVFH SLRVVGRDLI LRLNGRLSPA RVADLEVAFG DITTDGRIRS VRATPWEVRE 
HDHPDLPRLA LRFDRRSFGR LRQLIDAVNA SEMEAVRPSV