| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0864 |
|---|
| Symbol | |
|---|
| ID | 8322927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 885376 |
|---|
| End bp | 886191 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644951997 |
|---|
| Product | Dolichyl-phosphate beta-D-mannosyltransferase |
|---|
| Protein accession | YP_003109482 |
|---|
| Protein GI | 256371658 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGAGG TGCCGTCGTC ACGACCATGG GTCGTGATCC CGACGTACAA CGAAGTCGAC
AACATCGGGC CCATGCTCGG AGCGGTGCTC GCGGCGGTAC CCGAGGCGCA CGTGCTGGTG
GTCGATGATG GCTCTCCCGA TGGCACCGCG GCGGCGGTGC GCGCCGTCTC GGAGCGGGAC
GAGCGCGTTC GTTTGCTGGC ACGGGAACAG AAGACGGGAC TCGGCGGCGC CTATCGAGAC
GGCTTCAAGG TGGCGATCTC GGAGGGAGCG ACCAGCGTGG TCGAGATCGA CGCCGACTTT
TCGCACGATC CCGCGGCGAT TCCTGCGCTC CTCGCGGCGC TCGACGACGG TGCCGCGCTC
GCGATTGGGT CGCGCTACGT GCTTGGGGGT CGCTCGCCAG GATTGTCGAG AGAGCGTCTT
GCACTGTCGC GCGGGGGCAA TCTCTACGCG GCGTTCATGC TCGGCCTACC GGTGCGTGAC
GCAACGGCAG GGTTTCGCGC GTATCGGACG GACGTCATTC ACGAGGTCGG CTTTCGTTCC
TCGCGTGCCG ATGGCTACGG CTTCCAGGTG GAACTCACGC GCCTCGTCAA CGACGCAGGC
TATCGGATCG TGGAGATTCC GATCACGTTT CGTGATCGGC GAGCGGGCAC ATCGAAGATG
TCGGCCAAGA TCGTGGTCGA GGCCATGGTG CTGTGCACGA TTTGGGGTAT CGGACGTCGG
TTCCCGTGGC TCAACGAGCA ACGGCAGGAG GCGCTCATCG ACCGCCTCGG CGCCGTCGTC
GATCGGGGAG CGCGCCTGTG GTCGACGAGG CGTTGA
|
|---|
| Protein sequence | MEEVPSSRPW VVIPTYNEVD NIGPMLGAVL AAVPEAHVLV VDDGSPDGTA AAVRAVSERD
ERVRLLAREQ KTGLGGAYRD GFKVAISEGA TSVVEIDADF SHDPAAIPAL LAALDDGAAL
AIGSRYVLGG RSPGLSRERL ALSRGGNLYA AFMLGLPVRD ATAGFRAYRT DVIHEVGFRS
SRADGYGFQV ELTRLVNDAG YRIVEIPITF RDRRAGTSKM SAKIVVEAMV LCTIWGIGRR
FPWLNEQRQE ALIDRLGAVV DRGARLWSTR R
|
|---|
| |