Gene Afer_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0863 
Symbol 
ID8322926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp884753 
End bp885319 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID644951996 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003109481 
Protein GI256371657 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.859258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGCAT GGATGGACCT CGAGATGACA GGTCTCGACC CTGAGCGGTG CGTCATTCTC 
GAGATCGCCG CCATCGTGAC CGACGACGAA CTCGAAACCG TTGCCGAGCT CGGCCCGCTC 
GTCCTCCACG CAACCGACGA GGAGCTGGCG GTGATGGAGC CCGTCGTCGT GCAGATGCAC 
TCTGCCAACC ACCTCCTCGA AGACGTCCGG CGAGCGTCGC TCACCATCGA CGAGGCCGAA 
TCGACCGTCC TCGCCTTCTT GAAGGCCCAT CTTCCCGATC CCCACCAGGT GCCCCTGTGC 
GGCAACTCCA TCGGCACCGA TCGTCGGTTT CTCGCGCGCC ACATGCCCAA GGTCGAGGCC 
CTGCTCCACT ACCGATCGAT CGACGTCTCC AGCCTCAAGG AGCTCGCGCG CCGCTGGTAC 
CCCGAGGTCA TCGAGCACAT GCCGCAGAAG AACCCCGCGC ATCGCGCGCT CGACGACGTA 
CGGGACTCGA TCGCCGAGCT GCGCTACTAC CGCAGCTCTA TGCTGCGCCC TCGCGAAGGC 
GGACAGGTCG ACGCACGAGG CGAGTGA
 
Protein sequence
MLAWMDLEMT GLDPERCVIL EIAAIVTDDE LETVAELGPL VLHATDEELA VMEPVVVQMH 
SANHLLEDVR RASLTIDEAE STVLAFLKAH LPDPHQVPLC GNSIGTDRRF LARHMPKVEA 
LLHYRSIDVS SLKELARRWY PEVIEHMPQK NPAHRALDDV RDSIAELRYY RSSMLRPREG 
GQVDARGE