Gene Afer_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0861 
Symbol 
ID8322924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp882508 
End bp883581 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content71% 
IMG OID644951994 
Productglycosyl transferase family 2 
Protein accessionYP_003109479 
Protein GI256371655 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAGC GCTCTCTGGG TGTGCTCGGC GTCGTGGCAG GTGCGTGTGG TCTTGCTCGA 
CTTGGCGATC CGTTGCCCGT GGCACGCGAG ACCCCTCGCG GCCATGTGGT GGTGGCCATC
CCTGCTCACA ACGAGGCACG ACACATCGAT GTCGTGCTCG CCTCGATCCG ACGACAGCGC
TGCGAGCACC TCGATGTGCG CCTGGTCGTG GTCGACGACG CGAGCGACGA CGAGACGGCG
GAGCGCGCGC GGCGCGCCGG TGCACACGTC ATCTCCGCGG GTCCCGTCGC CGACGGCGTC
AATCCGAAGG CAGCCGCCCT CGCACACGTC GACCTCGGTG ATGCCGACTG GGTGCTGTTT
GTCGACGCGG ACGTCGAGTT CGTTGCGGAC GACGGCCTGG CGCGCTTGAT CGCGATGGTG
GAGACCAACG ATGGGGGGCT CGTGTCGGTC CAGCCGCGCC CACGCCTCGA CGGCTGGTGG
GCACCACTGA CGGCCTGGCT GTGGCTGGTG CCGATGGTTG CGAGTGGGGC CTTCTGGCCG
GGTGCGCGCC ATCGGTCGCG GGTGGCCTTC GGCCCGGTGC TCGCGATGCG GACGTCGACC
TGTCGGAGCA TCGGTGGTCA CGCGGCACTT GCGAGTGAGG CGGTCGACGA CGTCGCGATG
GCGGCGGCGG TACGTCGTCG TGGCGAGCGC GTCGTGGTCT GGGCTGGGGG CGATGCCGTG
CAGATGGACC CGTACGAGGG CCTCGCCGAG ACGGTGGCTG GTCTGCGCAA GAACATCGTC
ATCGGCGCCG GTGCGGCCGG TGCGCTCCCA TCCTTCGGTG CGGTCGCTTG GGTGGTCGGC
ACGATCGGGG CACTCGCTCG ACTGCGCCGC GGTGACTGGA GGGCTCTCCC GACGGCGCTC
GGAGGTCTTG GTGTCGCGGT CCTCGGAGCG CGTCGGCTTC GACTTGCTCG TTGGAGGCAC
GTGTGCCTGG TCACCGCGGG CCTGGGCCTC CTCGTCGCGA CGACCGCGCT GTCGGTCGTC
GACATGCTCC GGGGGCAGAC ACGGTGGCAC GGGCGACGGC TACGGCTTCG CTAG
 
Protein sequence
MLERSLGVLG VVAGACGLAR LGDPLPVARE TPRGHVVVAI PAHNEARHID VVLASIRRQR 
CEHLDVRLVV VDDASDDETA ERARRAGAHV ISAGPVADGV NPKAAALAHV DLGDADWVLF
VDADVEFVAD DGLARLIAMV ETNDGGLVSV QPRPRLDGWW APLTAWLWLV PMVASGAFWP
GARHRSRVAF GPVLAMRTST CRSIGGHAAL ASEAVDDVAM AAAVRRRGER VVVWAGGDAV
QMDPYEGLAE TVAGLRKNIV IGAGAAGALP SFGAVAWVVG TIGALARLRR GDWRALPTAL
GGLGVAVLGA RRLRLARWRH VCLVTAGLGL LVATTALSVV DMLRGQTRWH GRRLRLR