| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0860 |
|---|
| Symbol | |
|---|
| ID | 8322923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 881462 |
|---|
| End bp | 882490 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644951993 |
|---|
| Product | Luciferase-like monooxygenase |
|---|
| Protein accession | YP_003109478 |
|---|
| Protein GI | 256371654 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATCG CGGCCCAAGT CGACTACGCC GGGGACGTGC GCCAGGCGGC CGACACGGTC
GCTCGCTGGG AGGATGCGGG CGTCGACGTC GCCTTCGTGC CAGAGGCCTA CGGTCAAGAT
GCGATCAGCC TTCTCGGTTA CCTGGCGGCT CGTACCGAGC ACATGTTGCT CGGGCCCGGC
ATTCTTCCGA TCTTCTCGCG AACGCCAGCG CTGATTGCAC AGACTGCGGT CGGTCTCGAC
GTGGTCTCGG GGGGCCGTGC GGTGCTCGGG CTCGGTGCAT CGGGTCCGCA GGTCGTGGAG
GGGTGGCACG GGGTCGCCTA CGATCGCCCG TTGGCTCGCA CGCGAGAGGT CGTCGAGATT
TGCCGTACGA TCTGGCGCCG CGAGCCTCTC GTTCACCACG GCATCTACGA ACTTCCCGCG
ACCGGGCCCG GCACGACGGG GCTCGGCAAG CCGCTCAAGC TCATCACCCA CCCGCCGCGC
GAGCGGATCC CGATCTACCT GGCCGCCATC GGGGCGCGCA ACGTCGCGCT CGCGGCGGAG
ATCGCCGAAG GTTGGCTTCC CATCCTGTTC TCACCGGAGC GTGCGGATGC GGTGTGGGGC
GAGTCTCTCG AAGCCGGGCG TGCGGCGCGC GATGCCTCGC TCGGGCCGCT CGACATCGTC
GCCGGGGGGA TCGTCTCGAT CGGTCCGGAT CGCGAGGCGC TCCGTGATCT CGCTCGGCCG
TTCGTCGCGC TCTACGTGGG GGGTATGGGC GCTCGCGGGC GCAACTTCTA CCACGACGTG
CTCGTACGTT ACGGATTCGA GGAGGCTGCG GACGCGATCC AAGAGCGCTA CCTGGCCCAC
GATCGGCACG GCGCCGAGGC GGCGGTGCCC GAGGCGTTGC TCCGCGAACT CACGCTCGTC
GGTACGGAGG CAGAAGTTGC GGCGAGACTC GATGCCTGGG CCCGAGCTGG GGTGACGACG
CTGCTCGCGA CGCCGGTCGG TCCGGACCCG CTCGGGACGC TGAAGCGTCT CGCAGCGCTC
GCGCGGTAG
|
|---|
| Protein sequence | MRIAAQVDYA GDVRQAADTV ARWEDAGVDV AFVPEAYGQD AISLLGYLAA RTEHMLLGPG
ILPIFSRTPA LIAQTAVGLD VVSGGRAVLG LGASGPQVVE GWHGVAYDRP LARTREVVEI
CRTIWRREPL VHHGIYELPA TGPGTTGLGK PLKLITHPPR ERIPIYLAAI GARNVALAAE
IAEGWLPILF SPERADAVWG ESLEAGRAAR DASLGPLDIV AGGIVSIGPD REALRDLARP
FVALYVGGMG ARGRNFYHDV LVRYGFEEAA DAIQERYLAH DRHGAEAAVP EALLRELTLV
GTEAEVAARL DAWARAGVTT LLATPVGPDP LGTLKRLAAL AR
|
|---|
| |