Gene Afer_0856 details

Gene Information

• Locus tag: Afer_0856
• ID: 8322919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 877952
• End bp: 878551
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644951990
• Product: multiple antibiotic resistance (MarC)-related protein
• Protein accession: YP_003109475
• Protein GI: 256371651
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2095] Multiple antibiotic transporter
• TIGRFAM ID: [TIGR00427] membrane protein, MarC family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.66496
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCACGA AGTTCTTCGT CGAGGCTCTG GTGACGTTGC TCGTGATCAT CGATCCCATC 
GGCAACATCC CGACCTTCCT GGTCGTCACC CGTGGTCGGG ACCAGCGTGC GCGCCGGCGC 
CTCGCCACGG AGGCGGTGCT CGTCGCGGCG GCGGTGCTCG CGGTCTTCGC GCTCGCCGGT 
TCCCAGATCC TCGACTATCT CGGGATCTCG ATTCCCGCTC TTGAGGTGTC GGGAGGCCTG 
TTGCTGCTGA TCGTGGCGCT CGAGCTGCTG ACCGGTCGGG GTGGGTCGAT CGGTACCACG 
GAGGAGGGTA TCTCGGTGGC CGTGGTTCCC CTTGCAACCC CGCTCATCGC GGGTCCGGGC 
GCCATTGCTG CGGTGTTGGT GCTGGCCAAG CGAGCTGCGA CAGCGCCACT TTCGGTGGCG 
CTCGCTGGGG CGTTGGTCGG TTCGATGGTC ATCTTGTGGG TCGTCTTGCA CTACGCCTCG 
GCCTTGGTCC GCATCCTGAA GGAGTCGGGC ATCGCGCTCT TGTCGCGGGT GTTCGGCTTG 
CTCCTGGCCG CCATCGCGGT CCAGCTCGCC GCCGAGGGAA TCCGCGGCTT CGGGCTCTAG 

 

Protein sequence

MVTKFFVEAL VTLLVIIDPI GNIPTFLVVT RGRDQRARRR LATEAVLVAA AVLAVFALAG 
SQILDYLGIS IPALEVSGGL LLLIVALELL TGRGGSIGTT EEGISVAVVP LATPLIAGPG 
AIAAVLVLAK RAATAPLSVA LAGALVGSMV ILWVVLHYAS ALVRILKESG IALLSRVFGL 
LLAAIAVQLA AEGIRGFGL