Gene Afer_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0849 
Symbol 
ID8322912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp871180 
End bp872205 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID644951983 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003109468 
Protein GI256371644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTCG CGATCAATGG CTTTGGTCGT ATCGGGCGGA TGTTCCTGCG CGCGATCGAG 
CGAACCGGTT CGGATCTCGA GGTGGTGGCC ATCAACGACC TGACCTCACC GGCCGTCAAC 
GCGCAGCTGC TGCGGCGCGA CTCGACGCAT GGGCCGTTCC CGGCGCACGT GGCGATCGAG 
GGCAACGATC TCGTCGTCGG AGAGCGGCGA ATTCGTGTGC TCGCCGAGCG TAACCCTGCT 
GACCTGCCGT GGAAGGAGCT CGAGGTCGAC ATCGTCGTCG AGTCGACGGG CATCTTCACC 
GACGGCGACA AGGCTCGGGC GCACCTCGAG GCGGGCGCTC GCTCCGTGGT GATCTCGGCG 
CCCGCGACGA ACGTGGACGG TACGTTCGTG GTCGGCGTGA ACGACACGCT CTACGACCCC 
GAACGGCACC ACATCATCTC GAACGCGTCG TGCACCACGA ACTGTTTCGT CCCCATGGTC 
AAGGTCATCA ACGACGCGTT CGGTATCGAG CGCGGTCTCA TGACGACCGT GCACGCCTAC 
ACGAACGACC AGAACCTGCT CGATCTGCCG CACAAGGACC TGCGGCGCGC ACGGGCGGCG 
GCGATCAACA TCGTCCCCAC CAGCACGGGC GCGGCTCGCG CGACGTCGCT CGTCATCCCC 
GAGATGCAGG GGCGTCTCGA CGGGGGCGCG ATCCGTGTGC CGGTCGTCGA TGGGTCGATC 
ACCGACGTCA ACGTGGTGGT GCGGGCCGAG GTCGGCCGCG ACGACGTGAA CGAGGCCTTT 
GCCCGAGCAG CTGCGGCGGG ACCGCTCGTC GGCAAGCTCG TCTACTCGGA GGAGCCGCTC 
GTCTCGAGCG ACATCGTCGG GTCCCCGGCC TCGTGCACCT TCGATGCTCC GCTGACCATG 
ACGATGCCGC TCGGCAACGG GACGACGCTC GTCAAGGCGT TCGGCTGGTA CGACAACGAG 
ACCGGCTACT CGCACCGGCT CCTCGACCTC GTCGAGATCG TCGCCGGTGG GCTCGGAGCG 
CGTTGA
 
Protein sequence
MRVAINGFGR IGRMFLRAIE RTGSDLEVVA INDLTSPAVN AQLLRRDSTH GPFPAHVAIE 
GNDLVVGERR IRVLAERNPA DLPWKELEVD IVVESTGIFT DGDKARAHLE AGARSVVISA 
PATNVDGTFV VGVNDTLYDP ERHHIISNAS CTTNCFVPMV KVINDAFGIE RGLMTTVHAY 
TNDQNLLDLP HKDLRRARAA AINIVPTSTG AARATSLVIP EMQGRLDGGA IRVPVVDGSI 
TDVNVVVRAE VGRDDVNEAF ARAAAAGPLV GKLVYSEEPL VSSDIVGSPA SCTFDAPLTM 
TMPLGNGTTL VKAFGWYDNE TGYSHRLLDL VEIVAGGLGA R