| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0844 |
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| Symbol | |
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| ID | 8322907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 863891 |
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| End bp | 866728 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951978 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003109463 |
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| Protein GI | 256371639 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.752183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGT GGATCCGCGT TCGCGGCGCG CGAGAGCACA ACCTCCAGAA CGTCTCGGTG
GACGTGCCAC GCGATCGTCT CGTGGTCATC ACGGGTCTGT CGGGCTCGGG CAAGAGTTCG
CTCGCGTTCG ACACGATCTT CGCCGAGGGA CAGCGTCGCT ACGTCGAGTC GCTGTCGTCG
TATGCCCGGC AGTTCCTCGG TCTCATGGAG AAGCCCGACG TCGATGTCAT CGATGGGCTC
TCACCTGCCA TCGCGATCGA CCAGAAGTCG GCTTCGCACA ATCCCCGCTC GACCGTCGCG
ACCGTCACGG AGATCTACGA CTACCTGCGT TTGCTCTACG CGCGCGTCGG TCATCCCCAC
TGCCCATCGT GCGGACGTGA GGTGAGCCGG CAGACGCCCC AGGACATCGT GGACTGGGTC
CTCGCACGTT ATGAGAACAG GCGTTTGCTG GTCGTGGCGC CGCTCGTTCG CGGCCGCAAG
GGAACCTACG ACGAGCTGCT CGACCGACTG GCGCGCGAGG GATGGTCGCG CGTGCTCGTG
GACGGGGTGC TGTGGTCGCT CGACGACCGA GGCTCCATCA ACCTGGCGCG CTACGAGGCG
CACACCATCG CGGTGGTCGT CGACCGGATC GTGCCCAAGT CCGCCGACCG CCAGCGTCTG
ACCGAGTCGG TGGAGACGGC GCTCAAGGCC GCTGGCGGCG TCGTCGAGGT CGTGCCGGTC
GGCGACGACG GCGAGCTCGG AGCGGGCGAG CGCTTCTCCG AGACGCTCGC CTGTGCCGTC
TGCGGCATCT CGCTGGGCGA GCTCGAACCT CGGAGCTTCT CGTTCAACAG CCCCTTCGGT
GCCTGTCCGG CTTGTGGGGG GCTCGGGGTC CGCTTCGTCG TCGACGAGGA TCTCGTCATG
CCCGACCCGA ATCGCTCGGT CCTCCAGGGC GGCGTCGTCG CGCTCGGGAC GCTGCGGGCC
GATCTCGTTC GTCGGCAGAT GGAGCGCGCC CTGCGCGCCG CGGGTTTCTC GCTCTCGACT
CCGGTCGGCA AGCTTCCCGA GGCGGCCCGA CGCCTCATCC TCGAGGGCGC TTCCGAGCCG
ATCGAGGAGC GCTGGGTCGA TCGTGCCGGT CGTGAGCGCA GGGCCCAGGT GACGTTCCAG
GGCGTCGCCG CCTTCCTCGA GCGACGGCGG AGCGAGGCCG AGTCGGAGGT GGCTCGTCAG
CTCGCCGAGA GCTTCATGCG TGAGGTGCCG TGCGATGCCT GCGGCGGCAC CCGGTTGCGG
CCAGAGGCCC GGAGCGTGAC CGTCGATGGG GTGAGCCTCG ACACGCTCGT CAACGCCTCG
ATCCGCCGTG CGGTCGAGGT GGTGGATGCG ATGCGCTTCG GGGAGCGCGA GGCGACCATC
GCCACCCCTG TGCTGCGCGA GATTCGCGCA CGGCTGCAGT TCCTCTGCGA CGTGGGGCTC
GACTACCTGA CGCTCGGTCG GGCGGCGAGA ACGCTGTCGG GCGGGGAGGC CCAGCGCATC
CGGCTTGCCT CGCAGATCGG CTCGGGCCTC GCCGGGGTGC TCTACGTGCT CGACGAGCCG
TCGATCGGGC TCCACCAGCG GGACAATCGA CGCTTGATCG ACACGCTGGT GCACCTACGG
GATCTCGGCA ACACGGTGAT CGTCGTCGAG CACGACGAGG AGACGATTCG CGCCGCGGAC
TGGGTGGTCG ATGTCGGACC GGGCGCGGGC GAGCACGGCG GCACGATCGT GCACGCCGGC
ACGGTCGCCG AACTCGAGAC GGTCGAGTCC TCCCTCACCG GTGCCTACCT CTCGGGGCGC
CGTGCGATCG ACGTGCCGGT GGCTCGGCGC ATGCCCGAGC GGGGATGGTT GCGGGTGCTG
GGCGCTCGCG AGCACAACCT GGCCGACATC GACGCTGCGT TCCCGATCGG CCTTTTGACC
TGTGTGACCG GGGTATCGGG GTCGGGCAAG TCGACGTTGG TGAACGAGAT CTTGTTCCGG
GCACTCAGGG CGCAGCTGCA CCGCTCGCAC GACGTCCCCG GTCGCCACAA GGCCATCGAG
GGCATCGAAC TCGTCGACAA GGTGATCGAC ATCGATCAGG CACCGATCGG CCGCACCCCG
CGCTCGAATC CTGCGACCTA CACCGGTCTG TTCGACCACG TTCGCCGTCT CTTCGCCGAG
ACACCCGAAG CGCGGGCTCG TGGCTATCGA CCAGGTCGCT TCTCGTTCAA CGTCAAGGGG
GGGCGCTGCG AGGCGTGCCA AGGCGAGGGA ACGGTTCGCA TCGAGATGAA CTTCCTCGCC
GACGTGTACG TGACCTGCGA TGTCTGTGGC GGCTCGCGCT ACAACCGTGA CACCCTGGAG
ATCCGCTACC GTGGGCTCAC CATCGCCGAC GTGCTCGCGC TCTCGGTCGA GGAGGCGTTG
GCGTTCTTCG CGAAGCAGCC GGCGATCGCG CGCCACCTCA CGACGCTGGC CGAGGTGGGA
CTTGGTTACG TCCGTCTCGG TCAGGCGGCC ACGACCCTTT CGGGCGGCGA GGCCCAGCGC
GTCAAGCTCG CAACCGAACT CGCGCGGCGA GCGACCGGGC GAACGGTCTA CATCCTCGAC
GAGCCGACGA CGGGACTGCA CTTCGAGGAC GTGCGCAGCT TGCTCGGGGT GCTGCACTCG
CTGGTGGATC AGGGCAACAC GGTGATCGTG ATCGAGCACA ACCTCGACGT GATCAAGACG
GCCGACTGGA TCATCGATCT CGGACCCGAA GGTGGCAGTG GCGGCGGCAC CGTCGTGGCG
CAGGGTACGC CGGAGGACGT GGCCCAGGTG CCCAGCTCGC ACACGGGGGC CTTCCTCGCT
CCGTTGCTTG GGCGATGA
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| Protein sequence | MPEWIRVRGA REHNLQNVSV DVPRDRLVVI TGLSGSGKSS LAFDTIFAEG QRRYVESLSS
YARQFLGLME KPDVDVIDGL SPAIAIDQKS ASHNPRSTVA TVTEIYDYLR LLYARVGHPH
CPSCGREVSR QTPQDIVDWV LARYENRRLL VVAPLVRGRK GTYDELLDRL AREGWSRVLV
DGVLWSLDDR GSINLARYEA HTIAVVVDRI VPKSADRQRL TESVETALKA AGGVVEVVPV
GDDGELGAGE RFSETLACAV CGISLGELEP RSFSFNSPFG ACPACGGLGV RFVVDEDLVM
PDPNRSVLQG GVVALGTLRA DLVRRQMERA LRAAGFSLST PVGKLPEAAR RLILEGASEP
IEERWVDRAG RERRAQVTFQ GVAAFLERRR SEAESEVARQ LAESFMREVP CDACGGTRLR
PEARSVTVDG VSLDTLVNAS IRRAVEVVDA MRFGEREATI ATPVLREIRA RLQFLCDVGL
DYLTLGRAAR TLSGGEAQRI RLASQIGSGL AGVLYVLDEP SIGLHQRDNR RLIDTLVHLR
DLGNTVIVVE HDEETIRAAD WVVDVGPGAG EHGGTIVHAG TVAELETVES SLTGAYLSGR
RAIDVPVARR MPERGWLRVL GAREHNLADI DAAFPIGLLT CVTGVSGSGK STLVNEILFR
ALRAQLHRSH DVPGRHKAIE GIELVDKVID IDQAPIGRTP RSNPATYTGL FDHVRRLFAE
TPEARARGYR PGRFSFNVKG GRCEACQGEG TVRIEMNFLA DVYVTCDVCG GSRYNRDTLE
IRYRGLTIAD VLALSVEEAL AFFAKQPAIA RHLTTLAEVG LGYVRLGQAA TTLSGGEAQR
VKLATELARR ATGRTVYILD EPTTGLHFED VRSLLGVLHS LVDQGNTVIV IEHNLDVIKT
ADWIIDLGPE GGSGGGTVVA QGTPEDVAQV PSSHTGAFLA PLLGR
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