| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0830 |
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| Symbol | |
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| ID | 8322893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 852279 |
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| End bp | 854060 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951964 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_003109449 |
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| Protein GI | 256371625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.297317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAC CACGCGTCCT GATCGTGTCC GCGCGCCTTG GCGGCGGCCA CGACGGGGCG
GCAAGGGCCA TCGCCGATCA TCTTGGCCGT CACGGCGCCG ACGTCAGCAT CGTCGACTTC
CTCGACGCAG CCCCACGTCT CGGCACGATG CTCGAGACCG TCTTCCGCGT CGAGGTCGAG
CGTGCGCCCT GGGCGTATCG GCTCGAATTC GAGCTCTGGT CACACATCCC TGCACTGACC
AAGGTCGCGC GCGCAGTGTT CCGACGAGCC TTCGGCGCGA AGGTTCGCGA ATGGCTCCAG
ACGATCGACC CGGACATCGT CATCGCGACC CATCCCTTCC CCGCGCAGCT GCTCGGCGAG
TTCCGCAGGC GGCGTGACCC GTGCGTCGCG GACCGCCACC TCGTCACCTT CCTCACCGAC
TTCTCCGTCC ATCCGATGTG GATCCACCCC GACATCGACG TCCACCTCGC GGTCGCCGAG
ACCGCCGCTG TCCAGGCCAA GCGCCGCGGC CACCTGCGTG GACCCGTCGT GCGCGTCGGG
CCCTTCGTCG ACGAGCGCTT CCGGATGCTG CCGGAGCGAG CCAGCGCGCG TCGCCACCTC
GGCTTGCCGC CTGACGCGCG CATCGCCCTC ATCGTCGGCG GTTCGTGGGG GGTGGGCAAA
CTCGTCGAGA CCGCCGCAGC GTTGGCCAGC ACGGGCGACG TCCTGCCCGT CGTGCTCGCC
GGTCACAACG AGGAGCTCCG AGCGCGCGCA GCCGCGGCCG ACGGGATCGT CGCCGTCGGT
TGGACGAACG AGGTCGACCT CTGGCTCGCC GCCTCGGACG TGGTCGTCCA GAACGCGGGA
GGACTGTCAT CGCTCGAGGC GATGGCCGCA CGCCGTCCGG TGATCTCCTA CGAACCGATC
GTCGGCCACG GTGCCGAGAA CGTCGCCGCG ATGGCCGAGA GCGGCGTGAC GTTCTGGGCA
CGCAACGTAC GCGAACTCCG CGACGCGGTC GTCCACTACG CCTCCGCGCC CGAAGAGCTC
ACGCTCCCGG CGCTCGCACA GTTCCAGGCA ACCCCCGAAG CACCCATCCT CGACCTGCTG
ACAGAGGCTC CGCCGCGACC AGCACTCTCC CCCCAGCGCG TTGTGCTCCG TCGAGGACTC
GTCGGGGTCG CGAGCGCCGC GTCCGTCTTC GTCGCGGTCA ACGTCGCATC GGGCCTCATC
GGCTACGAGG GCCTCAACCT GTCCGCAGCC GCACGGCCGA CCCACGTTGC CTATCTCGCG
GCGCTCCTGC CGACACCGGA CCTCGCGTCG CCGGCACTCG ACGCCGCCCT GCACAACGAC
CACATCGCCG TCGTCGTGAC CGAACGCGGG GTTCGTCGTG ACCCAGCCGC CGTGGCGATG
GCCGGAGCAG CGGGCGTCGC GCTCGTCAAC GGGGGCGCGG GTTCGCGTAT CGGCGACCTC
AGCCTCATCG TCCCCGTCAA TGATCTTCAG CTCGGACGCG CGGCGCTCAG CGCCGTCCTT
GGCAGCCCCG TCAACGTGTA CGTGCCGCAG AACACCATCA ACGCGGTCGA TCTCGCCTGG
GCGGCGCTGC ACCACCAGAG CGTGATCCCC GCCCGCATCA TCCCGCCACG AGCGCTCGCA
AGCACGATCG CGCCCGGTTC CATCGTCGAA GTCGCTGATC CCACCGCCTC CGTCGCGAGT
GCACTGGCGC TCGCGGCGTC CACCCGCCAG GCGCTGGCAG CACGCCACCT CGTCGGCGCT
CCGGTGAGCG AGCTCGCGCG CGCCCCGGAG CTGAGCGCGT GA
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| Protein sequence | MSQPRVLIVS ARLGGGHDGA ARAIADHLGR HGADVSIVDF LDAAPRLGTM LETVFRVEVE
RAPWAYRLEF ELWSHIPALT KVARAVFRRA FGAKVREWLQ TIDPDIVIAT HPFPAQLLGE
FRRRRDPCVA DRHLVTFLTD FSVHPMWIHP DIDVHLAVAE TAAVQAKRRG HLRGPVVRVG
PFVDERFRML PERASARRHL GLPPDARIAL IVGGSWGVGK LVETAAALAS TGDVLPVVLA
GHNEELRARA AAADGIVAVG WTNEVDLWLA ASDVVVQNAG GLSSLEAMAA RRPVISYEPI
VGHGAENVAA MAESGVTFWA RNVRELRDAV VHYASAPEEL TLPALAQFQA TPEAPILDLL
TEAPPRPALS PQRVVLRRGL VGVASAASVF VAVNVASGLI GYEGLNLSAA ARPTHVAYLA
ALLPTPDLAS PALDAALHND HIAVVVTERG VRRDPAAVAM AGAAGVALVN GGAGSRIGDL
SLIVPVNDLQ LGRAALSAVL GSPVNVYVPQ NTINAVDLAW AALHHQSVIP ARIIPPRALA
STIAPGSIVE VADPTASVAS ALALAASTRQ ALAARHLVGA PVSELARAPE LSA
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