Gene Afer_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0828 
Symbol 
ID8322891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp849190 
End bp850209 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID644951962 
Producthypothetical protein 
Protein accessionYP_003109447 
Protein GI256371623 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGT ACCTCGTCGT TCCCGAATTC GCGGGCTTTC GCAAGACGCT GTCGCTCCTC 
GACCGCGCCA ACTATTGGCT GGTACCGCTC GCCGCCTTGG CCGAGGCTCT GTCGCTGTTC
GCGTATGCGA AGCTCACCGA GACGGTACTC CCGCGCCCCA CGCCGAGCAT CGGGCAGCTC
GCCAAGGTCG ACCTCGCGGG CCTTGCGGTC TCGCACGTCC TCCCTGGTGG CTCCGCGAGC
GGCGTCGGGC TCACCGCGCG GCTGCTGTCG AACCTGGGGG TTCGCGGGGC CGACACCGGT
GTCGCGCTCG CGACCCAGAG CGTCGGATCT GCCCTCATCT TGAACGCACT GCTGTGGCTC
GCCCTGCTCG TGTCGCTCCC GTTCTACGGC TTCAACGAGG TCTACCTCGT CGTCGCCGTC
CTCGGCGTCG CGCTGATGGC GATCTCCATT GCGGTCGTGA TCCTGCTCAC CCGTGGCAAC
CGTCGCACCC AGCACGCGGT CGGTACGGTG ATCGACCACG TCCCTCCGCT CGCCCATCGT
CGTCGCTCCA TCGAACACGC CATCGCTCAA ACGGCCGAGC GACTCCGCGC ACTCGGGCGC
GACCCGCAGC TCCTCCGGCG CGCGTCAGCG TGGGCGCTCG CCAACTGGCT CTTCGATGCA
ACGACCCTGT GGATCATGCT GGCGGCGTTC GGCCAGCTCA TGAACCCGGT CGCGCTCATC
GTCGCCTACG GCATCGCCAA CGTCGCTGCG GTGCTGCCGC TCACGCCGAG CGGACTCGGG
GTCGTCGAGA CCCTCGCGAT CACCCTCCTG ACCGGATTCG GTGCGCCCCG AGGTGTCGCG
ATCCTCGGCG TCCTCACGTG GCGGATCTTC AACTTCTGGC TCCCGATCCC CGTCGGCGTC
GCCGCCTACG TCTCACTGCG CGTCCAGCGC GGCGAGGACG TGACGCTCGA GCTCGATCGG
ATCGACCCGA ACCTCGGCCG ACCCGACCCC GACGTGTCCG ACCACGATCC CAACCATTGA
 
Protein sequence
MIEYLVVPEF AGFRKTLSLL DRANYWLVPL AALAEALSLF AYAKLTETVL PRPTPSIGQL 
AKVDLAGLAV SHVLPGGSAS GVGLTARLLS NLGVRGADTG VALATQSVGS ALILNALLWL
ALLVSLPFYG FNEVYLVVAV LGVALMAISI AVVILLTRGN RRTQHAVGTV IDHVPPLAHR
RRSIEHAIAQ TAERLRALGR DPQLLRRASA WALANWLFDA TTLWIMLAAF GQLMNPVALI
VAYGIANVAA VLPLTPSGLG VVETLAITLL TGFGAPRGVA ILGVLTWRIF NFWLPIPVGV
AAYVSLRVQR GEDVTLELDR IDPNLGRPDP DVSDHDPNH