| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0821 |
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| Symbol | |
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| ID | 8322884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 839502 |
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| End bp | 842459 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951955 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003109440 |
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| Protein GI | 256371616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.366025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA CCGAGATCGT GCGAGCTCGC ATCGACGACG ACGAGGTTCG AGCGCCGATC
GGCACACTTC TCGTCGAGCT CGTGGGGCGC GACGTCCCGC ACGTGTGCTA TCACCCGCAG
CTCGGCACCA TCGGTACGTG CGATACGTGC CTCGTCGAGG TCGATGGCCA GCTGGCGCGA
GCCTGTGAGG TGTCGCTCCG CGAGGGGATG CAGGTGCGTA CGCGAGGTGT GGATGTGCGT
GCGGCTCGCC TGCGTGCCGC CGGCGCCCTG CTCGCCAACC ACGAGCTCTA CTGCACCGTC
TGCGACAACT CCAACGGCGA CTGTGTGCTC CACGAGAGCG TCCGCGACCT CGGGGTGAAC
GAGGAGCTGG TGCCCTTTAC GCCCAAGCCC TACGAGGTCG ACGCCTCGCA CCCCATGTAT
CGCTACGACC CCTCGCAGTG CATCCTCTGC GGGCGCTGCG TGCAGGCCTG CCAGGAGGTG
CAGGTCAACG AGACGCTCAG CATCGATTGG TCGCTGGAGC GGCCGCGGGT CGTCTGGGAC
GGGGGCAAGC CCGCCGGCGA ATCGAGCTGC GTGAGCTGTG GCCATTGCGT GAGCGTGTGT
CCGTGCAACG CGCTCATGGA GAAGAGCATG CTCGGTCGCG CCGGCACCCT CACGGGGCTC
GGCCGAGCTG CGCTCGGTCC GCTGATCGAG CTCACCAAGG CGACCGAGCC TGCGATCGGC
CTCGGGCCCA TCTTCGCGCT CTCGGACGCC GAGGCGCAGA TCCGTCGCGG CCTCGTGCAA
CGGACCAAGA CCGTGTGTAC CTACTGCGGC GTCGGCTGCA GTTTCGATGT CTGGACGCGA
GGCCGCGACG TTCTGCGGAT CGCGCCCGAG CGAGGCCCCG CCAACGGGAT CTCGACCTGC
GTCAAGGGCA AGTTCGGTTG GGGCTTCGTC GACGCGCCAG ACCGCCTGGT GCGGCCGCTC
GTACGACGTG AGGGCCACTT CGAGGAGGCG AGCTGGGACG ACGCGCTCGA CGAGGTCGCC
GGCCGGTTGC GTGCGATCGT CGCCGAGCAC GGGCCTGACG CCGTCGGCAT CATCGCCTCC
TCCAAGTGCT CGAACGAGGA GGCCTATCTC GCCCAGAAGC TTGCGCGGGC CGTCATCGGG
ACGAACAACA TCGACAACTG CTCGCGCTAC TGTCAGTCGC CGGCCACCAT GGGCCTGTGG
CGAACCGTGG GCTATGGCGG TGACGCCGGT TCGATCAGCG ACATCGCCGC AGCAGATCTC
GTGGTCATCG TTGGCTCCAA CACCGCCGAG AGCCACCCTG TCATCGCGAC GAGGGTGAAG
CGCGCGCACA AGGAGGGGCG ATCGAAGTTC ATCGTTGCCG ACCTGCGCCG CCACGAGATG
GCGGAGCGAG CGGACCTGTT CTTGCGTCCC CGGCCGGGTA CGGACCTCGT GTGGCTGGCG
GCCGTGACGC GACTGATCAT CGAGGAGGGA CTGGCCGACA CGAGCTTTCT CGACGAGCGC
GTCGAGGGTT TCGACGCCTA CGTCGAGAGC CTTGCGGCCT TCGACCTCGC GACCGCGACG
CGCCTCACTG GCCTCTCCGA AGAGCAGCTG CGCCTCACGG CGCGCATGAT CGCCGAGGCC
GAACGCGTGT GCGTGCTCTG GGCGATGGGA GTCACCCAGC ACGAGGGTGG TTCGGACACC
TCGACGGCGA TCTCGAACTT GCTCCTCGTC ACCGGCAACT ATGGCCGACC GGGCACGGGG
GCCTACCCCT TGCGTGGCCA CAACAATGTC CAGGGCGCGA GCGACTTTGG CGCCATGCCC
ACGTACTTGC CCGGCTATGA GCCCATCGCC GACGACGAGG TCCGCCAGAA GTGGTCGACG
CTGTGGGGTG TGGAGGTCCC GGATCGACCC GGACTCGACA ACCACCAGAT GATCGACGCG
ATCCACGCCG GCTCGCTGCG GGCGCTCGTC GTCATCGGCG AGGAGCTCGG CATCGTGGAT
GCCAACGCGA CCTACGTCCA AGAAGCCCTC GGCTCGCTCG AGCTCTTGGT GGTGGCTGAT
CTCTTCCTGT CGCGAACGGC GTCGTTTGCC GACGTCGTCC TCCCGGCCGC GCCATCGCTG
GAGAAGGAGG GGACGTTCAC CAACACCGAG CGTCGCATCC AGCGCTTCTA TCGGGCGATG
GATCCGCTCG GTGAGGCACG TGCGGACTGG GTCTGGCTCT GCGACCTCGC CAACCGCCTG
GGCGCCGGGT GGAGCTACGA CCATCCAGGG GCCGTGATGG CCGAGGCTGC CGCAGGGGCT
GCGATCTTCG CTGGCGTCGA CTACGAACGA CTCGAGGGGT ATGCGTCCCT CCAGTGGCCG
GTGGCGGCCG ACGGAACCGA TTCGCCCCTG CTCTATACCG AGCGCTTCGC GTTCCCATCG
GGGCGCGCTC GCCTCGTTCC CGTGCCCTGG GTCGAGCCCA CCGAGCAGGT CGACGATGAC
TTCGATCTCC ATCTGAACAA TGGCCGCTTG CTCGAGCACT TCCACGAGGG CAACATGACC
TATCGCACCG CCGGGATCGC CGAGGTGACG CCGGGGCCCT TCGTCGAGGT GTCCGAAGAG
CTGGCCGCCG AACGACACAT CCGCGACGGA GCGCTCGTGC GCTTGGTGTC GCGCCGAGGT
GCCGTCCGGG TTCGTGCCCT CGTGACGGAC CGTGTGCGAG GACACGAGCT GTACTTGCCG
ATGAACGGGC GTGCCAACGA GGAGGCGGTC AACGTCTTGA CGAGCTCGTC GACCGACCGG
GCGACCCACA CGCCCGCCTT CAAGGAGCTC GCGGTGCGCC TCGAGGTGCT CGACGACCCC
GTCGCCGTCG CGCTCCCGAG GCGGAACTGG CGCTACGGCC AGCGGACGCC GCAACGAGGC
GTGGACATCG CCGCTCGCCG TGCCCGACCC GACTACGTCG ATCCCACACT GATCCAAGGA
GGTCGTCGCC GTGGCTGA
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| Protein sequence | MNKTEIVRAR IDDDEVRAPI GTLLVELVGR DVPHVCYHPQ LGTIGTCDTC LVEVDGQLAR
ACEVSLREGM QVRTRGVDVR AARLRAAGAL LANHELYCTV CDNSNGDCVL HESVRDLGVN
EELVPFTPKP YEVDASHPMY RYDPSQCILC GRCVQACQEV QVNETLSIDW SLERPRVVWD
GGKPAGESSC VSCGHCVSVC PCNALMEKSM LGRAGTLTGL GRAALGPLIE LTKATEPAIG
LGPIFALSDA EAQIRRGLVQ RTKTVCTYCG VGCSFDVWTR GRDVLRIAPE RGPANGISTC
VKGKFGWGFV DAPDRLVRPL VRREGHFEEA SWDDALDEVA GRLRAIVAEH GPDAVGIIAS
SKCSNEEAYL AQKLARAVIG TNNIDNCSRY CQSPATMGLW RTVGYGGDAG SISDIAAADL
VVIVGSNTAE SHPVIATRVK RAHKEGRSKF IVADLRRHEM AERADLFLRP RPGTDLVWLA
AVTRLIIEEG LADTSFLDER VEGFDAYVES LAAFDLATAT RLTGLSEEQL RLTARMIAEA
ERVCVLWAMG VTQHEGGSDT STAISNLLLV TGNYGRPGTG AYPLRGHNNV QGASDFGAMP
TYLPGYEPIA DDEVRQKWST LWGVEVPDRP GLDNHQMIDA IHAGSLRALV VIGEELGIVD
ANATYVQEAL GSLELLVVAD LFLSRTASFA DVVLPAAPSL EKEGTFTNTE RRIQRFYRAM
DPLGEARADW VWLCDLANRL GAGWSYDHPG AVMAEAAAGA AIFAGVDYER LEGYASLQWP
VAADGTDSPL LYTERFAFPS GRARLVPVPW VEPTEQVDDD FDLHLNNGRL LEHFHEGNMT
YRTAGIAEVT PGPFVEVSEE LAAERHIRDG ALVRLVSRRG AVRVRALVTD RVRGHELYLP
MNGRANEEAV NVLTSSSTDR ATHTPAFKEL AVRLEVLDDP VAVALPRRNW RYGQRTPQRG
VDIAARRARP DYVDPTLIQG GRRRG
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