Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0813 |
Symbol | |
ID | 8322876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 825709 |
End bp | 826677 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644951947 |
Product | beta-lactamase domain protein |
Protein accession | YP_003109432 |
Protein GI | 256371608 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCACCA AGCCGTTCGC CTCCTCGGCA GACCTCGCGC CCAAGCACGA GGTCCTCGAG CATCTCGCCG ATGGTGTCGT CGCCTTGACC GCCGAAGGTG ACCCCAACGT CGGTGCGATC GCGACGAGCG AGGGGCTGGT CTGCGTGGAG GCGCGTGCGA CGCCAGTGGC GGCTCGGCGC TGGCTCGAGC GACTGCACGG CGTGCTGGAT GGGCCGGTGA GCTACCTGGT GCTCTCGCAC TACCACGCTG TGCGGGTGCT CGGGGCGAGC GCCTTCGACG CGGGTGCGAT CGTGGCACAC ACCGCCACCG CCGAACTGAT CGAGGAGCGA GGTGCCGAGG ACTGGGCCAG TGAGCAGGCT CGCATGCCTC GACTGTTCGA AGAGCCGGCG TCGATCCCGG GCTTGACGCG GCCGACGCTC ACCTTCGCCG ACGAGCTGCG TCTTGGCCGT GGGGGTGGAC GAGGCGACAT CTGGCTGTGG TGGCTTGGTC GGGGCCATAC CCGTGGAGAC ATCGTCGTGT GGTTGCCGCG CGAGCGGGTG CTCTTCGCCG GCGATCTCGT CGAGGCCCGG GCCGCGCTCT ACACGGGCGA TGCCTACCAC CGCGAGTGGT CGGGCCCGAC GCTCGATGCG ATCGCCGACC TCGGTGCCGA GGTGCTCGTC GGGGGTCGAG GGGCCGTCGT TCGGGGCAGG GAGGCCGTGG CGGCGGCGAT CGCGCAGTCG CGGCGCTTCC TCCAGGTCCT CATCGACGAG TCCTCGCGCG CGCTGGACGC CGGTGGCGGC CTCCGCGAGG CCTTCGGCGC CTGCTACGAG GCTCTCGCGC CGACCTATGG CTCCTGGCCG ATCTTCGAGC ACACCATCCC GTTCGACGTC GCCCGTGTCG TCGAGGAACT CCAAGGGGTC GAGCACCCCA CGATCTGGAC GACGGAGCGC GATCGGGCCG TCTGGGACGA GCTGCAGGGG TCACGGTGA
|
Protein sequence | MSTKPFASSA DLAPKHEVLE HLADGVVALT AEGDPNVGAI ATSEGLVCVE ARATPVAARR WLERLHGVLD GPVSYLVLSH YHAVRVLGAS AFDAGAIVAH TATAELIEER GAEDWASEQA RMPRLFEEPA SIPGLTRPTL TFADELRLGR GGGRGDIWLW WLGRGHTRGD IVVWLPRERV LFAGDLVEAR AALYTGDAYH REWSGPTLDA IADLGAEVLV GGRGAVVRGR EAVAAAIAQS RRFLQVLIDE SSRALDAGGG LREAFGACYE ALAPTYGSWP IFEHTIPFDV ARVVEELQGV EHPTIWTTER DRAVWDELQG SR
|
| |