Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0812 |
Symbol | |
ID | 8322875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 824531 |
End bp | 825712 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951946 |
Product | homogentisate 12-dioxygenase |
Protein accession | YP_003109431 |
Protein GI | 256371607 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTACT ACCGTCGCGT GGGTGAGGTG CCGCGCAAGC GCCACCAGTA CGTACGTGCG CACACAGGCG CGCGTATCGC CGAGGAGCTG ATGGGCAAGG AGGGCTTCGC GGCGGAGTCG TCGCTGCTCT ACCACCTGGG GCGGCCGACG GCCATCGTGG ATGCAGCACC CGTCGCGATT GCGGGCACCA CCCTCGTCGC GAATCGTCCA CTGCTCCCTC GACACCTTCG CACGCCCAAG CTCGCCGGCC TCGGTGGCGA CGCTGCCACG GACCGGCACC TCTTGCTCGG CAACGACGAC GTGTGGATCT CGTGGGTGGT GGCGGATCGT CCGAGCTCGC TGCAGCGACA CGCCGTCGGG GACGAGTGCT ACTACGTCCA TCGTGGTACG GGCGCGTGCG AGTCGGTCTT CGGCACCATC CGAGTAGGTC CCGGCGACTA TCTCGTGTTG CCTGCGTCGA CGACCTATCG GCTCGTCCCG GACGAAGGTT CGGTCCTCGA GTGTCTGGTG CTCGAGGCCC GGGGTCATAT CGAGATCCCG GACCGCTACC TCTCCCAGCG GGGTCAGCTG CTCGAGGCGG CACCCCTGTG CGAGCGAGAC CTGCGGGGCC CCGAGGGCCC GCTCGTCGTC GAGGGCGAGG ACGTGGACGT GATCGTGCGT ACCCGTCTGG ACGCCACGCG TTACACCTAC GCGACACACC CCTTCGACGT CGTGGGTTGG GACGGGTGCT GCTATCCGTT CGCGTTCCAG ATCCGCGACT TCGAGCCGAT CGTGAAGCGA TTCCACGCGC CACCGCCCGT GCATCAGACG TTCGCCGGAC CGAACTTCGT CGTGTGCTCG TTCGTCCCGA GGCCGTTCGA CTTCGATCCG GAGGCGGTCG CGGTGCCCTA CCACCATGCG AACGTCGACT CCGATGAGGT CCTCTTCTAC GCCGACGGGA ACTTCATGTC GCGGGCGGGC TCCGGGATCG AGGCGGGTTC GATCTCGCTG CATCCGTCGG GCTTCGTCCA CGGGCCCCAA CCGGGTTCGG TGGACGCAGC ACGGGGTCAG CCAGGCACCG AGGAGGTGGC CGTGATGGTC GATACCTTCC GGCCGCTCAT GCTGTCGGAG ACGGCACTCG CGATCGACGA CGACGCCTAC CCGTGGACCT GGTCGAGGCG CGGTCCTGGA GCGCAGTCGT GA
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Protein sequence | MPYYRRVGEV PRKRHQYVRA HTGARIAEEL MGKEGFAAES SLLYHLGRPT AIVDAAPVAI AGTTLVANRP LLPRHLRTPK LAGLGGDAAT DRHLLLGNDD VWISWVVADR PSSLQRHAVG DECYYVHRGT GACESVFGTI RVGPGDYLVL PASTTYRLVP DEGSVLECLV LEARGHIEIP DRYLSQRGQL LEAAPLCERD LRGPEGPLVV EGEDVDVIVR TRLDATRYTY ATHPFDVVGW DGCCYPFAFQ IRDFEPIVKR FHAPPPVHQT FAGPNFVVCS FVPRPFDFDP EAVAVPYHHA NVDSDEVLFY ADGNFMSRAG SGIEAGSISL HPSGFVHGPQ PGSVDAARGQ PGTEEVAVMV DTFRPLMLSE TALAIDDDAY PWTWSRRGPG AQS
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