Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0796 |
Symbol | |
ID | 8322859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 806430 |
End bp | 807950 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951932 |
Product | histidine ammonia-lyase |
Protein accession | YP_003109417 |
Protein GI | 256371593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGCA TTCCGGGTGA GCTGACCCTT GCCGAGCTGC GGTCGTTGTG GGCGGGGGAA ACCTCGTTCG AACTCGACGC GAGTGCCTGG GAGGTGATCG ATCGCGCCGC GCGTACCGTG GCCGAACTCG CCGATCGTGA CGACCCGGCC TACGGCATCA ATACGGGGTT CGGTCGCTTG GCATCGACGA AGATCCCGCG CGACCAACTC GAGCTCCTCC AGCGCAATCT CATCTTGTCG CACGCGGTGG GCGTCGGCGA TCCGCTCGAC CCGCCGACCG TGCGACTCGT CCTCGCGCTG AAGGTCGCAA GCCTCGCACG TGGTGCTTCG GGGGTTCGCC GCGAGCTCGT CGAGGCTCTC CTCGCGCTCC TCGAGCACGA CGTGTTGCCG ATCATCCCTG AGAAGGGATC GGTCGGGGCC TCCGGTGACC TCGCGCCACT GGCGCACGTC GGCGCGCTGC TCATGGGTGT CGGTGATGCG CTCGTCGCGG GTGCGCGCGT CCCAGCCATC GATGCGCTCG CCGAGGCGGG GCTTGCTCCG CTGTCGTTCG CTCCCAAGGA GGGTCTCGCG CTCATCAACG GCACCCAAGT CTCGACGGCG ATCGCGCTCG CGGGACTGTT CGCCCTCGAG CGTACGCTCG CCGCTGCCGT CGTGGCGGGT GCGCTCGCCG TCGATGCGGC CGCTGGCTCC ATGGTGCCGT TCGACGCTCG CATCCACGCG CTCCGTGGCC ATCCGACCCA AGCAGACGTG GCCGCCGCGC TGACGACGCT GCTCGCGGGG TCAGGCATCG TCCAGAGTCA TCAGGACTGT GGCAAAGTGC AGGACCCCTA CTCCCTGCGT TGTCAGCCCC AGGTCCTCGG CGCGGTGCTC GATCTCGTGC GGATGCAGGC CGCCGTGCTC GAGCGAGAGG CCAACGGCGT CACGGACAAT CCGTTGGTCT TCGTCGAGAC CGGAGAGGTG CTCTCGGGCG GCAACTTCCA CGCCGAGCCG GTCGCCTTTG CCGCCGATGT GCTCGCGATC GGCGCTGCGG AGATCGGCGG CCTCGCCGAG CGTCAGCTCG CGCTGCTCAT CGACCACTCG CTGTCGGGCC TACCTCCGTT TCTCGTGCGC GAGGGCGGTG TGAACTCGGG CTTCATGATC GCGCAGGTGA CCGCCGCGGC GCTCGCGAGC GAGAACAAGA CGCTCGCACA CCCGGCGTCG GTCGATTCCT TGCCGACGTC GGCTAACCAG GAAGACCACG TGTCGATGGC CACCTTCGCG GCGCGCAAGC TCCACGAGGT CGTCGCCAAC ACGCAGACGG TGGTTGCGAT CACGCTGCTC GCTGCGGTCC AAGGCGTCGA GCTCCGTCGA CCCTTGCGCA GTTCGGATCG GCTCGAACAG GTGATCGCGC TCGTGCGCGA GTACGTGCCA CACTACGACC TCGATCACTA CCTCGCCCCG GACATCGCTC GAGCCACAGA GCTCGTACGG GCGGGCGCCA TCGCGGAGCA CGCACCGTTG CGCATTCTCG AGCAGCGCTA G
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Protein sequence | MRCIPGELTL AELRSLWAGE TSFELDASAW EVIDRAARTV AELADRDDPA YGINTGFGRL ASTKIPRDQL ELLQRNLILS HAVGVGDPLD PPTVRLVLAL KVASLARGAS GVRRELVEAL LALLEHDVLP IIPEKGSVGA SGDLAPLAHV GALLMGVGDA LVAGARVPAI DALAEAGLAP LSFAPKEGLA LINGTQVSTA IALAGLFALE RTLAAAVVAG ALAVDAAAGS MVPFDARIHA LRGHPTQADV AAALTTLLAG SGIVQSHQDC GKVQDPYSLR CQPQVLGAVL DLVRMQAAVL EREANGVTDN PLVFVETGEV LSGGNFHAEP VAFAADVLAI GAAEIGGLAE RQLALLIDHS LSGLPPFLVR EGGVNSGFMI AQVTAAALAS ENKTLAHPAS VDSLPTSANQ EDHVSMATFA ARKLHEVVAN TQTVVAITLL AAVQGVELRR PLRSSDRLEQ VIALVREYVP HYDLDHYLAP DIARATELVR AGAIAEHAPL RILEQR
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