Gene Afer_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0796 
Symbol 
ID8322859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp806430 
End bp807950 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content68% 
IMG OID644951932 
Producthistidine ammonia-lyase 
Protein accessionYP_003109417 
Protein GI256371593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGCA TTCCGGGTGA GCTGACCCTT GCCGAGCTGC GGTCGTTGTG GGCGGGGGAA 
ACCTCGTTCG AACTCGACGC GAGTGCCTGG GAGGTGATCG ATCGCGCCGC GCGTACCGTG
GCCGAACTCG CCGATCGTGA CGACCCGGCC TACGGCATCA ATACGGGGTT CGGTCGCTTG
GCATCGACGA AGATCCCGCG CGACCAACTC GAGCTCCTCC AGCGCAATCT CATCTTGTCG
CACGCGGTGG GCGTCGGCGA TCCGCTCGAC CCGCCGACCG TGCGACTCGT CCTCGCGCTG
AAGGTCGCAA GCCTCGCACG TGGTGCTTCG GGGGTTCGCC GCGAGCTCGT CGAGGCTCTC
CTCGCGCTCC TCGAGCACGA CGTGTTGCCG ATCATCCCTG AGAAGGGATC GGTCGGGGCC
TCCGGTGACC TCGCGCCACT GGCGCACGTC GGCGCGCTGC TCATGGGTGT CGGTGATGCG
CTCGTCGCGG GTGCGCGCGT CCCAGCCATC GATGCGCTCG CCGAGGCGGG GCTTGCTCCG
CTGTCGTTCG CTCCCAAGGA GGGTCTCGCG CTCATCAACG GCACCCAAGT CTCGACGGCG
ATCGCGCTCG CGGGACTGTT CGCCCTCGAG CGTACGCTCG CCGCTGCCGT CGTGGCGGGT
GCGCTCGCCG TCGATGCGGC CGCTGGCTCC ATGGTGCCGT TCGACGCTCG CATCCACGCG
CTCCGTGGCC ATCCGACCCA AGCAGACGTG GCCGCCGCGC TGACGACGCT GCTCGCGGGG
TCAGGCATCG TCCAGAGTCA TCAGGACTGT GGCAAAGTGC AGGACCCCTA CTCCCTGCGT
TGTCAGCCCC AGGTCCTCGG CGCGGTGCTC GATCTCGTGC GGATGCAGGC CGCCGTGCTC
GAGCGAGAGG CCAACGGCGT CACGGACAAT CCGTTGGTCT TCGTCGAGAC CGGAGAGGTG
CTCTCGGGCG GCAACTTCCA CGCCGAGCCG GTCGCCTTTG CCGCCGATGT GCTCGCGATC
GGCGCTGCGG AGATCGGCGG CCTCGCCGAG CGTCAGCTCG CGCTGCTCAT CGACCACTCG
CTGTCGGGCC TACCTCCGTT TCTCGTGCGC GAGGGCGGTG TGAACTCGGG CTTCATGATC
GCGCAGGTGA CCGCCGCGGC GCTCGCGAGC GAGAACAAGA CGCTCGCACA CCCGGCGTCG
GTCGATTCCT TGCCGACGTC GGCTAACCAG GAAGACCACG TGTCGATGGC CACCTTCGCG
GCGCGCAAGC TCCACGAGGT CGTCGCCAAC ACGCAGACGG TGGTTGCGAT CACGCTGCTC
GCTGCGGTCC AAGGCGTCGA GCTCCGTCGA CCCTTGCGCA GTTCGGATCG GCTCGAACAG
GTGATCGCGC TCGTGCGCGA GTACGTGCCA CACTACGACC TCGATCACTA CCTCGCCCCG
GACATCGCTC GAGCCACAGA GCTCGTACGG GCGGGCGCCA TCGCGGAGCA CGCACCGTTG
CGCATTCTCG AGCAGCGCTA G
 
Protein sequence
MRCIPGELTL AELRSLWAGE TSFELDASAW EVIDRAARTV AELADRDDPA YGINTGFGRL 
ASTKIPRDQL ELLQRNLILS HAVGVGDPLD PPTVRLVLAL KVASLARGAS GVRRELVEAL
LALLEHDVLP IIPEKGSVGA SGDLAPLAHV GALLMGVGDA LVAGARVPAI DALAEAGLAP
LSFAPKEGLA LINGTQVSTA IALAGLFALE RTLAAAVVAG ALAVDAAAGS MVPFDARIHA
LRGHPTQADV AAALTTLLAG SGIVQSHQDC GKVQDPYSLR CQPQVLGAVL DLVRMQAAVL
EREANGVTDN PLVFVETGEV LSGGNFHAEP VAFAADVLAI GAAEIGGLAE RQLALLIDHS
LSGLPPFLVR EGGVNSGFMI AQVTAAALAS ENKTLAHPAS VDSLPTSANQ EDHVSMATFA
ARKLHEVVAN TQTVVAITLL AAVQGVELRR PLRSSDRLEQ VIALVREYVP HYDLDHYLAP
DIARATELVR AGAIAEHAPL RILEQR