Gene Afer_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0790 
Symbol 
ID8322852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp800216 
End bp800836 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID644951925 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_003109411 
Protein GI256371587 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.318013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GGGTCTTCGG GGGCACCTTC GACCCTCTCC ACATCGGACA CCTCGTTGCC 
GCTCAGAACG CGCAGTACGC TGCCGCCCTC GACCGCGTTC TCTTCGTGGT GGCCAACGTG
CCCTGGCAGA AGGAGGCCGC TCGCGAAGTG ACCGACCCTG CGCTGCGGCT CGCGGTGGTG
CGCGCGGTCA TCGAGACCAT CGACGGATTC GAGGCATCGG ACCTCGAGAT CCGTCGTGGG
GGTCGCTCCT ACACGGTCGA CACGCTCCGC GAGCTGCGGG CTCAGCACCC GAACGACGAG
CTCTTCTTGA TCGTCGGCTC CGACGCCGCG AACCAGATGA GGACCTGGGA ACGAGCCGAC
GAGCTCCCGC TCCTCTCTCG CATCGTCGTC GTCAATCGCT ATGGCTACCC GAGCCCGACC
GTGCTCGAGG GCTTTCGCGA TCCGATCTTC GCCGAGATGC CCTGGCTCGA CATCTCCTCG
ACCGATCTGC GCGAACGCGT GCGCGATCGT CGCCCCCTCC AGTTCCTGTT GCCCGACGAG
GCCATCGCCG CCATCAATCG CTTCGGGCTC TACCACGACG CGCCCCCGCC ACACTCGGCG
ATACAGCCCA AGCCGGGCTA G
 
Protein sequence
MRIGVFGGTF DPLHIGHLVA AQNAQYAAAL DRVLFVVANV PWQKEAAREV TDPALRLAVV 
RAVIETIDGF EASDLEIRRG GRSYTVDTLR ELRAQHPNDE LFLIVGSDAA NQMRTWERAD
ELPLLSRIVV VNRYGYPSPT VLEGFRDPIF AEMPWLDISS TDLRERVRDR RPLQFLLPDE
AIAAINRFGL YHDAPPPHSA IQPKPG