| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0786 |
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| Symbol | |
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| ID | 8322848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 797518 |
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| End bp | 798378 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951921 |
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| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
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| Protein accession | YP_003109407 |
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| Protein GI | 256371583 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCTCG CCACTATCCG CACAGCAACG GGAACGCACG CCGCGATGGA TTTCGGTACC
CATTGGCGGC TGTTACCATT CCCGGACCTC GCGGCGGCGC TCCGCGCCGT CGAGGGAGAC
CTCGGCGCGT TCGGCGAGCT GCGTGCAGCC GAAGCCGTCG AAGCCGCCGA CGCCCGTTTC
GCCCCGACCG TGACGACCCC CGGAGCCATC ATCTGCCTGG GGCTGAACTA CGCCAAGCAC
ATGGACGAGA TGGGTCACGA CGAGCGTCCC GCCTTCCCGA CCTTGTTCGC GAAGTTCCCA
CGGTCCCTCA CGGGCCCCTT CGATCAGATC ACGCTCCCGG TCACGTCCCA TGAGGTCGAC
TGGGAGGTCG AGATCGGCGT CGTCATCGGT CGCCGAGCTC GCCACGTCGA TGTCGCCCAT
GCACTCGAGC ACGTCGCAGG CTACGTCGTC GTCAACGACG TCTCCATGCG CGACTACCAA
CATCGCACGA GCCAGTTCCT CCAAGGCAAG ATCTTCGAGG CCTCGACGCC CGTCGGGCCA
TGGATGGTGA CCCGCGACGA GGTCGATGAC GTCCGTGACG TGGCTCTCAC CACGCGCGTC
AACGGGACCA CGATGCAAGA TGGCCGATCA CGAGACATGC TCTTCGACGT CCCGACCACC
ATCGCCTACC TCTCCGAGAT CATGACCCTG GAGCCAGGAG ATCTCATCGC CATGGGCACA
CCCGATGGTG TCGGTGCCGG TCGAAGGCCG CCCGTCTTCC TCCGGCCCGG TGACGTGGTG
GAGAGCTCCG TCGAGGGGAT CGGCACGATG CGCAACGAGT TCGTCGCGCC AGACGCCGGC
CACACCGAGC ACCACTCGTA G
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| Protein sequence | MRLATIRTAT GTHAAMDFGT HWRLLPFPDL AAALRAVEGD LGAFGELRAA EAVEAADARF
APTVTTPGAI ICLGLNYAKH MDEMGHDERP AFPTLFAKFP RSLTGPFDQI TLPVTSHEVD
WEVEIGVVIG RRARHVDVAH ALEHVAGYVV VNDVSMRDYQ HRTSQFLQGK IFEASTPVGP
WMVTRDEVDD VRDVALTTRV NGTTMQDGRS RDMLFDVPTT IAYLSEIMTL EPGDLIAMGT
PDGVGAGRRP PVFLRPGDVV ESSVEGIGTM RNEFVAPDAG HTEHHS
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