Gene Afer_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0735 
Symbol 
ID8322795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp745121 
End bp745981 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID644951870 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003109358 
Protein GI256371534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.850791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGATC GCATCGTGGT CCTCGGTGCG GGCGGTCAGC TCGGTCGGCG GTTGGTGCGC 
GCGTTCGAGC GCACCAGCGC CGCGGAGGTC GTCGGTCTCG ATCGTCGAGC ACTCGACGTC 
ACCGAGCGTG TGGCGGTGCA CGGTGCCGTC GACGCACTCC GGCCACGCTG GATCGTGAAC 
GCCGCCGCGA TGACGGCCGT CGACGCCTGT GAGCGCGAGG TAGAGCGGGC GGTTCGGCTC 
AACGCCCTCG CCGTGCGTTG GCTCGTCGAG GCCGCCGAGC GCGCCGGTGC GCGCGTATGT 
CAGGTGTCGA CCGACTACGT CTTCGACGGT ACCGCCACGC GTCCTTATAC GGAGGCCGAC 
CAGCCGAACC CCATGAGTGT CTACGGCCTC ACGAAACTCC AGGGGGAGCG CGAGTTGCGT 
CCCGGGATCG ACAGTTGTGT GCGGACCTCC TGGCTGATGA GTGCCGACGA TCGTTGCATG 
CTCGGGACCA TCGACCGCCT TCGCCGAGGA CCTGGGCCCT TGCGCTTCGT CGAGGACCAG 
GTCGGTTCTC CGAGCTTCGC GGACGACGTC GCGCTCGGCA TCGTGGAGCT CGTGCGTCGT 
GAGGTGACCG GCGTCATCCA CGTGACGAAC GACGGTCAGG CGAGCTGGTA CGACGTCGCG 
AGGGAGGCAC TTCGGGCCTT TGGCGACGAT CCACACCGAG TCGAGCCGAT CCCCACGACG 
CAACTCGCCG GCAGCTTCGT CGCTCCGCGA CCTGCCTTCT CGGTGCTCGC CGGGGTCGTG 
CGCGCCGCGG TCGGGCTCGA GCCCCTGCGA CCGTGGCAGG AGGCGCTCGG AGCTGCGGTC 
AGCGAGCGTG CTCGTGGATG A
 
Protein sequence
MSDRIVVLGA GGQLGRRLVR AFERTSAAEV VGLDRRALDV TERVAVHGAV DALRPRWIVN 
AAAMTAVDAC EREVERAVRL NALAVRWLVE AAERAGARVC QVSTDYVFDG TATRPYTEAD 
QPNPMSVYGL TKLQGERELR PGIDSCVRTS WLMSADDRCM LGTIDRLRRG PGPLRFVEDQ 
VGSPSFADDV ALGIVELVRR EVTGVIHVTN DGQASWYDVA REALRAFGDD PHRVEPIPTT 
QLAGSFVAPR PAFSVLAGVV RAAVGLEPLR PWQEALGAAV SERARG