Gene Afer_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0730 
Symbol 
ID8322790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp739200 
End bp740966 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content69% 
IMG OID644951865 
ProductCarbamoyl-phosphate synthase L chain ATP- binding 
Protein accessionYP_003109353 
Protein GI256371529 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.858294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTCAT CGCTGCTGGT CGCGAACCGA GGTGAAATCG CGGTTCGGGT GATCCGCACC 
GCCAAGGAGC TCGGACTGCG AACCATCGCG GTGTACTCCG ACGCCGATCG CGATGCACTC
CACGTGCGCA TGGCCGACGA GGCCTGGGCG CTCGGCGGGC TCACCAGCCA AGAGAGCTAC
CTCAATACGA CCAAGCTCCT CGAGATCATC GAGCGCTCCG GCGCCGAAGC CGTCCACCCC
GGCTATGGCT TCTTCTCCGA GAACGCCGAC TTCGCCCGAG CGATCACCCA GGCCGGTGTC
ACGTTCGTCG GCCCACCCCC CGACGCGATC GAGGTCATGG GAGACAAGAT CTCGTCCCGA
CGAGCCGCCG AAGCCGCTGG CGTCGCCGGC GTCCCCGGCC TCACCCACCC GGTGGACGAT
CCCGAAGAGG TCGTGGCCTT CGGCGACGAG CATGGCTGGC CCGTCGCGAT CAAGGCTGCC
TATGGCGGCG GTGGGCGAGG CATGCGCGTC GTCACCCGCC CCGACGAGGC GGCCGAGGCC
CTCGCCTCCG CACGGCGCGA GGCACGCAGC GCGTTCGGAC GTGACGAGTG CTACCTCGAG
CGCTACCTCG CCTGGCCTCG CCATATCGAG ATGCAGGTCA TCGCGGACGA CCACGGCTCG
GTCCTGTGGC TGAGCGAACG CGACTGCTCC GCGCAACGAC GCCACCAGAA GCTGATCGAG
GAGACACCTG CACCGCACTT CCCCGACGAG ACCCGGCGCG CGATGGGCGA GGCTGCGTGC
GCCGTGGCGC GCGCCTGCGG GTATCGCAAC GCCGGTACCG TCGAGTTCCT CTACCAAGAC
GGCGCGTTCT ACTTCCTCGA GATGAACACG CGCCTGCAGG TCGAACATCC GATCACCGAA
CTCGTGACGG GTCTCGACCT CGTCGAGCTC CAGCTTCGGG TCGCCGCCGG CGAGCCCCTC
GGCTTCTCCC AGCACGACGT CGTGCGGCGC GGACACGCCA TCGAGGTGCG GATCAACGCC
GAGGACCCCG CCGGTGGCCG CTTCATGCCG ACCCCTGGCA CCATCACCCG CTTCGACCGG
CCCGACGGAC CAGGGGTGCG CGTGGACGCT GGCTACGACA CCGGCGACAC GGTCTCGCAG
TACTACGACA ACCTGGTCGC CAAGCTCATC GTCCACGCCG CCGATCGAGA CCACGCCATC
GCTCGTGCGA TCCGAGCGCT CGGAGAGCTC CGCATCGAGG GCGTCGCCAC GACCACACCG
GCCGACGTCG CCATCTTGGA CCACCCCGAC TTTCGCGCAG GAACCCACTC GACCCGTTGG
GTGGAAGAAC GCCTCGACCT GGGCGGCGTG GCCCCCGTCG CGACCGCATC CCAGGACGCT
CACGAGCTCG TGCCCACCCC GGTCATCGCC GAGGTGAACG GCAAGCGTGT CGCCGTCACG
CTCTATCTCG ACGCCGCAGC ACCGAGTGCG CCTGCTCCGC GCACGCCGAA TGCACCGAGC
CGACCTCAGC GAAGCTCATC GGCCAGAGCC GGTGCCCGAG CAGCACAGAC GGGCTCCGGC
GAGGTGAGCG TCCCGATGCA GGGCACCGTG GTGAAGGTCC CGGTCTCCCC AGGGCAACAG
GTCGACGCTG GTGAGGTCGT CATCGTGCTC GAGGCGATGA AGATGGAGAA CGCCATCTTG
GCCGAGCGCG CCGGTACCGT CCGCGAAGTG CGCGTCAACC CCGGCGACAC CGTCGGCACG
GGCGACATCG TCGTCGTGAT CGAGTAG
 
Protein sequence
MFSSLLVANR GEIAVRVIRT AKELGLRTIA VYSDADRDAL HVRMADEAWA LGGLTSQESY 
LNTTKLLEII ERSGAEAVHP GYGFFSENAD FARAITQAGV TFVGPPPDAI EVMGDKISSR
RAAEAAGVAG VPGLTHPVDD PEEVVAFGDE HGWPVAIKAA YGGGGRGMRV VTRPDEAAEA
LASARREARS AFGRDECYLE RYLAWPRHIE MQVIADDHGS VLWLSERDCS AQRRHQKLIE
ETPAPHFPDE TRRAMGEAAC AVARACGYRN AGTVEFLYQD GAFYFLEMNT RLQVEHPITE
LVTGLDLVEL QLRVAAGEPL GFSQHDVVRR GHAIEVRINA EDPAGGRFMP TPGTITRFDR
PDGPGVRVDA GYDTGDTVSQ YYDNLVAKLI VHAADRDHAI ARAIRALGEL RIEGVATTTP
ADVAILDHPD FRAGTHSTRW VEERLDLGGV APVATASQDA HELVPTPVIA EVNGKRVAVT
LYLDAAAPSA PAPRTPNAPS RPQRSSSARA GARAAQTGSG EVSVPMQGTV VKVPVSPGQQ
VDAGEVVIVL EAMKMENAIL AERAGTVREV RVNPGDTVGT GDIVVVIE