Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0730 |
Symbol | |
ID | 8322790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 739200 |
End bp | 740966 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951865 |
Product | Carbamoyl-phosphate synthase L chain ATP- binding |
Protein accession | YP_003109353 |
Protein GI | 256371529 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.858294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTCAT CGCTGCTGGT CGCGAACCGA GGTGAAATCG CGGTTCGGGT GATCCGCACC GCCAAGGAGC TCGGACTGCG AACCATCGCG GTGTACTCCG ACGCCGATCG CGATGCACTC CACGTGCGCA TGGCCGACGA GGCCTGGGCG CTCGGCGGGC TCACCAGCCA AGAGAGCTAC CTCAATACGA CCAAGCTCCT CGAGATCATC GAGCGCTCCG GCGCCGAAGC CGTCCACCCC GGCTATGGCT TCTTCTCCGA GAACGCCGAC TTCGCCCGAG CGATCACCCA GGCCGGTGTC ACGTTCGTCG GCCCACCCCC CGACGCGATC GAGGTCATGG GAGACAAGAT CTCGTCCCGA CGAGCCGCCG AAGCCGCTGG CGTCGCCGGC GTCCCCGGCC TCACCCACCC GGTGGACGAT CCCGAAGAGG TCGTGGCCTT CGGCGACGAG CATGGCTGGC CCGTCGCGAT CAAGGCTGCC TATGGCGGCG GTGGGCGAGG CATGCGCGTC GTCACCCGCC CCGACGAGGC GGCCGAGGCC CTCGCCTCCG CACGGCGCGA GGCACGCAGC GCGTTCGGAC GTGACGAGTG CTACCTCGAG CGCTACCTCG CCTGGCCTCG CCATATCGAG ATGCAGGTCA TCGCGGACGA CCACGGCTCG GTCCTGTGGC TGAGCGAACG CGACTGCTCC GCGCAACGAC GCCACCAGAA GCTGATCGAG GAGACACCTG CACCGCACTT CCCCGACGAG ACCCGGCGCG CGATGGGCGA GGCTGCGTGC GCCGTGGCGC GCGCCTGCGG GTATCGCAAC GCCGGTACCG TCGAGTTCCT CTACCAAGAC GGCGCGTTCT ACTTCCTCGA GATGAACACG CGCCTGCAGG TCGAACATCC GATCACCGAA CTCGTGACGG GTCTCGACCT CGTCGAGCTC CAGCTTCGGG TCGCCGCCGG CGAGCCCCTC GGCTTCTCCC AGCACGACGT CGTGCGGCGC GGACACGCCA TCGAGGTGCG GATCAACGCC GAGGACCCCG CCGGTGGCCG CTTCATGCCG ACCCCTGGCA CCATCACCCG CTTCGACCGG CCCGACGGAC CAGGGGTGCG CGTGGACGCT GGCTACGACA CCGGCGACAC GGTCTCGCAG TACTACGACA ACCTGGTCGC CAAGCTCATC GTCCACGCCG CCGATCGAGA CCACGCCATC GCTCGTGCGA TCCGAGCGCT CGGAGAGCTC CGCATCGAGG GCGTCGCCAC GACCACACCG GCCGACGTCG CCATCTTGGA CCACCCCGAC TTTCGCGCAG GAACCCACTC GACCCGTTGG GTGGAAGAAC GCCTCGACCT GGGCGGCGTG GCCCCCGTCG CGACCGCATC CCAGGACGCT CACGAGCTCG TGCCCACCCC GGTCATCGCC GAGGTGAACG GCAAGCGTGT CGCCGTCACG CTCTATCTCG ACGCCGCAGC ACCGAGTGCG CCTGCTCCGC GCACGCCGAA TGCACCGAGC CGACCTCAGC GAAGCTCATC GGCCAGAGCC GGTGCCCGAG CAGCACAGAC GGGCTCCGGC GAGGTGAGCG TCCCGATGCA GGGCACCGTG GTGAAGGTCC CGGTCTCCCC AGGGCAACAG GTCGACGCTG GTGAGGTCGT CATCGTGCTC GAGGCGATGA AGATGGAGAA CGCCATCTTG GCCGAGCGCG CCGGTACCGT CCGCGAAGTG CGCGTCAACC CCGGCGACAC CGTCGGCACG GGCGACATCG TCGTCGTGAT CGAGTAG
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Protein sequence | MFSSLLVANR GEIAVRVIRT AKELGLRTIA VYSDADRDAL HVRMADEAWA LGGLTSQESY LNTTKLLEII ERSGAEAVHP GYGFFSENAD FARAITQAGV TFVGPPPDAI EVMGDKISSR RAAEAAGVAG VPGLTHPVDD PEEVVAFGDE HGWPVAIKAA YGGGGRGMRV VTRPDEAAEA LASARREARS AFGRDECYLE RYLAWPRHIE MQVIADDHGS VLWLSERDCS AQRRHQKLIE ETPAPHFPDE TRRAMGEAAC AVARACGYRN AGTVEFLYQD GAFYFLEMNT RLQVEHPITE LVTGLDLVEL QLRVAAGEPL GFSQHDVVRR GHAIEVRINA EDPAGGRFMP TPGTITRFDR PDGPGVRVDA GYDTGDTVSQ YYDNLVAKLI VHAADRDHAI ARAIRALGEL RIEGVATTTP ADVAILDHPD FRAGTHSTRW VEERLDLGGV APVATASQDA HELVPTPVIA EVNGKRVAVT LYLDAAAPSA PAPRTPNAPS RPQRSSSARA GARAAQTGSG EVSVPMQGTV VKVPVSPGQQ VDAGEVVIVL EAMKMENAIL AERAGTVREV RVNPGDTVGT GDIVVVIE
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