| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0719 |
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| Symbol | |
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| ID | 8322779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 725114 |
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| End bp | 726721 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951854 |
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| Product | lipoyl synthase |
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| Protein accession | YP_003109342 |
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| Protein GI | 256371518 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B
[TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.219683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA CCCTGCGCGT CCGGTGGCTC GGGCGAACCG ATTACGACGA CGCCCTCGAG
CTCCAGCACC GCCTGCACGA GGGAACGGGG TCGTGGTTGC TGCTCCTCGA GCATCCGCAC
ACCTACACGA TGGGGGTGCG CGCGAAGCGC GAGCACGTGC TGGTGGACCC TGCCGATGTC
GGAGCACGGC TCGTGTGGAC CGATCGGGGT GGTGACGTCA CCTACCACGG ACCCGGTCAG
CTCGTTGCCT ACCCCATCGT CGACGTGCCG GTCGAGCCCG ACTCGACGCC GCGCTACGTC
CATCGACTCG AGCAGGTGCT GATCGAGACC TTGGCCGAGT TCCAGCTCGC TGCGTTCGCG
TTGGACGGCT ACCCGGGCGT GTGGGTCGAC GCCGCGGCAC CGCGCAAGAT CGCGGCGATC
GGCGTGAAAC TCACGCGGGG TCGTTCACTC CACGGCATCG CGCTGAACGT CACGACGGAC
CTTGGGATGT TCGGCCATAT CGTCCCCTGC GGAATCCCCG ACAAGCCGGT CACGTCGATG
GCCGCCGAGG GCGTCAGGGT GAGTGTGGAG GACGTCGCGC GGGTCTTTGC CCGACGCTTT
GCAGTGACGT TCGGACTCGA AGCCCGAAGT GCCGGTGTCG ACTGGCCGGT CGCCCAGCCG
GCGTCGTCCG AGTCGGCCAC CTCGCCGGTC GAGCGGCGCT TGCAACGGGC CGGCGTCTCG
CTCGGCGAAG CGGTTCCGTT CCATGCGCGC AAGCCGGCCT GGGTTCGACC ACGTGTCCGT
CATGGGAGCG AGGTCCTCGA ACTCAAGCGT CTCGTCGGCC AACTGTCGCT CGTCACCGTC
TGCGAGGAGG CGGGGTGCCC CAACCTCTCG GAGTGCTGGA AGGATGGGAC AGCGACCTTC
ATGATCAACG GCGAGCGTTG TACGCGTGCG TGCACGTTCT GTCTGGTCGA CACGAGCCAT
CCGCTGCCGC TCGACCCCGG CGAGCCCGAT CGGGTGGCTG CTGCGGTGGC CGCCCTCGAC
CTCGAGTTCG CGGTCGTCAC GGCCGTCGCT CGTGACGACC TGGCCGACGG CGGTGCCGAG
GCTTTTGCGC GAACGATCCG GGCGATCAAA CTGGCGCGTC CCACCACGCG AGTCGAGGTG
CTGATCCCGG ACTTCAAGGG CTCGGCGGCG GCGCTCGACA CCGTGCTCGA GGCTGGTCCC
GATGTGCTCA ATCACAACCT CGAGACGGTG CTTCGTCTGC AGCGGGCCGT GCGGCCAAGT
GCGCACTATG CCCGCAGTCT CGCGGTGTTG TCCCGAGCGC AGCGAGCCGG ATTCGTCACG
AAGTCCGGCC TGATGGTGGG GCTTGGCGAG TCGTTCGACG AACTCCGTGA GGCGATGGGG
GATCTCGCCG CCGCAGGGGT CTCGATCCTG ACCGTGGGAC AGTACCTCCG TCCGACGCAG
TGGCACGCGC CGGTCGCTCG GTACTGGCAT CCCGAGGAGT TCGACATGAT CCGGGACTAC
GCCACCGAAC TCGGGTTCCG CTTCGTCGAA GCCTCGCCGC TCGCACGCTC GTCGTACCAC
GCCAAGCGCG GATCGGACGC CGCGCAGGTC CTTGCGGAGC GCGCGTGA
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| Protein sequence | MSDTLRVRWL GRTDYDDALE LQHRLHEGTG SWLLLLEHPH TYTMGVRAKR EHVLVDPADV
GARLVWTDRG GDVTYHGPGQ LVAYPIVDVP VEPDSTPRYV HRLEQVLIET LAEFQLAAFA
LDGYPGVWVD AAAPRKIAAI GVKLTRGRSL HGIALNVTTD LGMFGHIVPC GIPDKPVTSM
AAEGVRVSVE DVARVFARRF AVTFGLEARS AGVDWPVAQP ASSESATSPV ERRLQRAGVS
LGEAVPFHAR KPAWVRPRVR HGSEVLELKR LVGQLSLVTV CEEAGCPNLS ECWKDGTATF
MINGERCTRA CTFCLVDTSH PLPLDPGEPD RVAAAVAALD LEFAVVTAVA RDDLADGGAE
AFARTIRAIK LARPTTRVEV LIPDFKGSAA ALDTVLEAGP DVLNHNLETV LRLQRAVRPS
AHYARSLAVL SRAQRAGFVT KSGLMVGLGE SFDELREAMG DLAAAGVSIL TVGQYLRPTQ
WHAPVARYWH PEEFDMIRDY ATELGFRFVE ASPLARSSYH AKRGSDAAQV LAERA
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