Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0714 |
Symbol | |
ID | 8322774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 719836 |
End bp | 720282 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951849 |
Product | ribonuclease H |
Protein accession | YP_003109337 |
Protein GI | 256371513 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTCG AGCGTCTCGT CTACACCGAT GGAGCCTGTT TGGGCAACCC GGGTCCTGGT GGCTGGGCCT GGTTCGAGCC TCTCACGGGA CGTCGAGCGT CCGGCTCGGA GGCGCAGACG ACCAATCAGC GGATGGAGCT CACCGCGGTG CTTCGAGCGC TCGAGGCAGA CCCCGCGCCC CTCGTACTCG TGCGCTCGGA CTCGCAGTAC GTCGTGCGGT GCTTCCAGGA GCGGTGGTGG GCACGCTGGC GGCAGAACGG CTTTCGCAAC GCCAAGGGCC AACCCGTGTC GAACCGCGAC CTGTGGGAGC TCGTCCTTCG TCTCGTGCTC GACGAGGGCC GCAGCGTTCG TTTCGAATGG GTGCGTGGCC ACGCTGGCGA TCCTGGGAAC GAGGAGGTCG ACCGGCTCGC CCAAGCTGCG GCCCGTGCGG TGGCGCGCGG CGTCTGA
|
Protein sequence | MAVERLVYTD GACLGNPGPG GWAWFEPLTG RRASGSEAQT TNQRMELTAV LRALEADPAP LVLVRSDSQY VVRCFQERWW ARWRQNGFRN AKGQPVSNRD LWELVLRLVL DEGRSVRFEW VRGHAGDPGN EEVDRLAQAA ARAVARGV
|
| |