Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0702 |
Symbol | |
ID | 8322762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 708731 |
End bp | 710302 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951837 |
Product | histidine kinase |
Protein accession | YP_003109325 |
Protein GI | 256371501 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTGA ACTCGCTCGG ATACCTGGGG CGTCTCGCAC GATCTCGTTG GCGCGTCGTT CGGTTCTTCG GTCGCCTCGC TGCGTCGGTG GTGGTCCGCA CCACCGTCGC GGCCACCGTC GCCGTCGGTC TCGCGCTCCT CGCAAGCCTC GTCGCTACCG TGCTCGTGCT CCGTACCGCC CTGACGAGGG GGATCGTCCA GACCGCTCGT AGCGAGGCCT ACGACATCGT CCTCCTCGTG CGCAACGGCG ACGTGCCTCG ACCGCTCCCG CTCCCGCGCG GCGATCTTGC GGCCCAGATC GTCTCGAGCA CCGGGCAGGT CGTCGCTGCG ACCCCCAACC TCCGTGGCGT CGCCCCACTC GTCAATCCGC ACCACGTCCC ACCCGCCGGT CTCGTCGTCA CGCGGGCGAC GAGCAAGGCG CGGTCGATCC TGGTCGGCCA CGACATCGAC ATCCGATCGG TGCTCGTCGC CGAGCCCATC GCGCTGACCA CACGCGCAGC AGCGACCCTC GCGCACAGCG CCGTACCTGC CCAGGTCGGC AGCTCCGGCG TCGAGACCTA CTACGTGTTC ACCATCGCCT CGCTCGCCAG TGTCGATCAG GCGACGAGGA CCTTGGTGCA CATCTTCGAC GTCGTCTATC CGCTCGTGCT CCTCGTCGTC GCCAGCGCCA CGTGGTGGCT GGCGAGGCGA GCGCTGGCAC CGGTCGACCA GATGATCAGC GACGTCGCAG AGATCACCTC GTCGCAGCTC GACCAGCGCG TCACCGAACC GCCGGGCGAC GATGAGATCG CCCGACTGGC ACAGACGATG AACGCCATGC TCGCACGGCT CGAACACGCG CTCATCCGCG AGAAGCAGTT CATCCAGGAC GCGTCGCACG AGCTGAAGAG CCCGCTCTCG GCGCTGCGCA CCACCCTCGA GGTCGGTGCG CTCCACCCGG AGATCACCGA CTGGGACGAA TCGACGCAGA TCGCCCTGTC CGAGGCGGAT CGCATGCAGC GCCTGATCGA GAGCCTGCTC CTCCTCGCGC GCGCCGAGAC CGGACCCCGA CGCCCCGCCT CCACGGAGCT CGACCTGGTC GGTGTCGTCG AGGACGAGGT CGCTCGCCTC GAACGCCTCA ATCCCCGCCT GAGCTTCGCG CTCGCTACCG ATGTGCATGC CACGATCGCT GCCGAGCCAG AGTTGCTCCG GTCGCTGGTT CGCAACCTGC TCGAGAATGC TGCACGACAC GCGACCTCTC GCGTTCGGGT TCGGACGTCC ACGCTCGTGA CCGGCTCCCT CGGGCCCGGC GTGACGCTCG ATGTGGACGA CGACGGACCC GGCATCCCTC CTGATCGCCG CGACGAGGTC TTCGAGCGCT TCGCGCGGCT CGATACGGCC CGCGCCCGTC ATGACGGCGG TACGGGCCTT GGGCTCGCCA TCGTACGAAG CGTCGCCGTC GGGCTCGGGG GTCGCGTGCG CGTCCTCGAC AGCGACCTCG GTGGCGCCCG CTTCCGAGTC GAACTCCCCA CTGCTACCGT GACTGCAGCC GTTTCGTTCG CCACCCCCCT GCGACAGAAG GAGCTTTCGT GA
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Protein sequence | MRLNSLGYLG RLARSRWRVV RFFGRLAASV VVRTTVAATV AVGLALLASL VATVLVLRTA LTRGIVQTAR SEAYDIVLLV RNGDVPRPLP LPRGDLAAQI VSSTGQVVAA TPNLRGVAPL VNPHHVPPAG LVVTRATSKA RSILVGHDID IRSVLVAEPI ALTTRAAATL AHSAVPAQVG SSGVETYYVF TIASLASVDQ ATRTLVHIFD VVYPLVLLVV ASATWWLARR ALAPVDQMIS DVAEITSSQL DQRVTEPPGD DEIARLAQTM NAMLARLEHA LIREKQFIQD ASHELKSPLS ALRTTLEVGA LHPEITDWDE STQIALSEAD RMQRLIESLL LLARAETGPR RPASTELDLV GVVEDEVARL ERLNPRLSFA LATDVHATIA AEPELLRSLV RNLLENAARH ATSRVRVRTS TLVTGSLGPG VTLDVDDDGP GIPPDRRDEV FERFARLDTA RARHDGGTGL GLAIVRSVAV GLGGRVRVLD SDLGGARFRV ELPTATVTAA VSFATPLRQK ELS
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