Gene Afer_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0702 
Symbol 
ID8322762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp708731 
End bp710302 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content69% 
IMG OID644951837 
Producthistidine kinase 
Protein accessionYP_003109325 
Protein GI256371501 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGA ACTCGCTCGG ATACCTGGGG CGTCTCGCAC GATCTCGTTG GCGCGTCGTT 
CGGTTCTTCG GTCGCCTCGC TGCGTCGGTG GTGGTCCGCA CCACCGTCGC GGCCACCGTC
GCCGTCGGTC TCGCGCTCCT CGCAAGCCTC GTCGCTACCG TGCTCGTGCT CCGTACCGCC
CTGACGAGGG GGATCGTCCA GACCGCTCGT AGCGAGGCCT ACGACATCGT CCTCCTCGTG
CGCAACGGCG ACGTGCCTCG ACCGCTCCCG CTCCCGCGCG GCGATCTTGC GGCCCAGATC
GTCTCGAGCA CCGGGCAGGT CGTCGCTGCG ACCCCCAACC TCCGTGGCGT CGCCCCACTC
GTCAATCCGC ACCACGTCCC ACCCGCCGGT CTCGTCGTCA CGCGGGCGAC GAGCAAGGCG
CGGTCGATCC TGGTCGGCCA CGACATCGAC ATCCGATCGG TGCTCGTCGC CGAGCCCATC
GCGCTGACCA CACGCGCAGC AGCGACCCTC GCGCACAGCG CCGTACCTGC CCAGGTCGGC
AGCTCCGGCG TCGAGACCTA CTACGTGTTC ACCATCGCCT CGCTCGCCAG TGTCGATCAG
GCGACGAGGA CCTTGGTGCA CATCTTCGAC GTCGTCTATC CGCTCGTGCT CCTCGTCGTC
GCCAGCGCCA CGTGGTGGCT GGCGAGGCGA GCGCTGGCAC CGGTCGACCA GATGATCAGC
GACGTCGCAG AGATCACCTC GTCGCAGCTC GACCAGCGCG TCACCGAACC GCCGGGCGAC
GATGAGATCG CCCGACTGGC ACAGACGATG AACGCCATGC TCGCACGGCT CGAACACGCG
CTCATCCGCG AGAAGCAGTT CATCCAGGAC GCGTCGCACG AGCTGAAGAG CCCGCTCTCG
GCGCTGCGCA CCACCCTCGA GGTCGGTGCG CTCCACCCGG AGATCACCGA CTGGGACGAA
TCGACGCAGA TCGCCCTGTC CGAGGCGGAT CGCATGCAGC GCCTGATCGA GAGCCTGCTC
CTCCTCGCGC GCGCCGAGAC CGGACCCCGA CGCCCCGCCT CCACGGAGCT CGACCTGGTC
GGTGTCGTCG AGGACGAGGT CGCTCGCCTC GAACGCCTCA ATCCCCGCCT GAGCTTCGCG
CTCGCTACCG ATGTGCATGC CACGATCGCT GCCGAGCCAG AGTTGCTCCG GTCGCTGGTT
CGCAACCTGC TCGAGAATGC TGCACGACAC GCGACCTCTC GCGTTCGGGT TCGGACGTCC
ACGCTCGTGA CCGGCTCCCT CGGGCCCGGC GTGACGCTCG ATGTGGACGA CGACGGACCC
GGCATCCCTC CTGATCGCCG CGACGAGGTC TTCGAGCGCT TCGCGCGGCT CGATACGGCC
CGCGCCCGTC ATGACGGCGG TACGGGCCTT GGGCTCGCCA TCGTACGAAG CGTCGCCGTC
GGGCTCGGGG GTCGCGTGCG CGTCCTCGAC AGCGACCTCG GTGGCGCCCG CTTCCGAGTC
GAACTCCCCA CTGCTACCGT GACTGCAGCC GTTTCGTTCG CCACCCCCCT GCGACAGAAG
GAGCTTTCGT GA
 
Protein sequence
MRLNSLGYLG RLARSRWRVV RFFGRLAASV VVRTTVAATV AVGLALLASL VATVLVLRTA 
LTRGIVQTAR SEAYDIVLLV RNGDVPRPLP LPRGDLAAQI VSSTGQVVAA TPNLRGVAPL
VNPHHVPPAG LVVTRATSKA RSILVGHDID IRSVLVAEPI ALTTRAAATL AHSAVPAQVG
SSGVETYYVF TIASLASVDQ ATRTLVHIFD VVYPLVLLVV ASATWWLARR ALAPVDQMIS
DVAEITSSQL DQRVTEPPGD DEIARLAQTM NAMLARLEHA LIREKQFIQD ASHELKSPLS
ALRTTLEVGA LHPEITDWDE STQIALSEAD RMQRLIESLL LLARAETGPR RPASTELDLV
GVVEDEVARL ERLNPRLSFA LATDVHATIA AEPELLRSLV RNLLENAARH ATSRVRVRTS
TLVTGSLGPG VTLDVDDDGP GIPPDRRDEV FERFARLDTA RARHDGGTGL GLAIVRSVAV
GLGGRVRVLD SDLGGARFRV ELPTATVTAA VSFATPLRQK ELS