Gene Afer_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0684 
Symbol 
ID8322744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp687301 
End bp687900 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID644951821 
ProductHNH endonuclease 
Protein accessionYP_003109309 
Protein GI256371485 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCG GGGTCCTCGT GCTCAACGCC TCGTATGAGG CCCTCGGTGT CGTCAGTGTC 
GAGCGTGCGG TCGGGATGGT GGTCGACGGG GACGTCGACG TCGTGGACGT CACCGACCTC 
GTGCTCCACT CGCCGTCGAC GGCGATTCGT GTTCCTTCGA TCCTGCGTCT CCAGCGCTAC 
GTGCGGATAC CGGCGACGCG TCGGATCGCA CCAACGCGGC GCGCCATCTT CGCACGCGAT 
GGTTATCGCT GTCAGTACTG CGGGGGGCCT GCCGAGAACG TCGACCACGT CATCCCGCGC 
AGCCGTGGCG GCCGACACGT CTGGGAGAAC GTGGTCGCCG CGTGCCGTGC CTGCAACGCT 
GCCAAGAGCG ATCGGCTGCC GGCCGAGGCG GGGATGCACC CTCGACGCGA GCCTCGTGCG 
CCGGCCGCGC GTACTGGTTG GTTGCTCACC GTTGGGGTGC GTCGGCCCGA GTGGGAGCCG 
TACCTTCGAG CGGCCTGGGG AGACTCAGCT CGGGATCTCT TGCTTGGCGG CGGCGACGAT 
GGCCGTGAGC TTGCTCGCCG GGAAGAGCGG ACTCACGCTC ACTCGCGCGC TGCCCGGTAG
 
Protein sequence
MTAGVLVLNA SYEALGVVSV ERAVGMVVDG DVDVVDVTDL VLHSPSTAIR VPSILRLQRY 
VRIPATRRIA PTRRAIFARD GYRCQYCGGP AENVDHVIPR SRGGRHVWEN VVAACRACNA 
AKSDRLPAEA GMHPRREPRA PAARTGWLLT VGVRRPEWEP YLRAAWGDSA RDLLLGGGDD 
GRELARREER THAHSRAAR