Gene Afer_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0680 
Symbol 
ID8322740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp685452 
End bp686156 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID644951817 
ProductLmbE family protein 
Protein accessionYP_003109305 
Protein GI256371481 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAG AGATCTACGA GCCGGCGGCG AGCGTCGCCC TCGCCTGCTT TGCCCACCCG 
GACGACGCCG AGGTGCTCTG CGGGGGGACG CTCGCGCGAC TCGCGGCCCA GGGAGCACGG 
GTCGTGCTGG TCGTGGCGAC CCGCGGCGAC AAGGGGCTCG CGCGGGTGGA CGACGCCGAG 
GAGCGCCGCA CCGGTGAACT GCTCGAAGCG GCCGCCATCC TTGCCATCGC CGACGTCGTC 
CAGCTGCGCT ATGGTGACGG CGATCTCTCC AACGACCTCG AGCTGCGTCG GCGGCTCGTG 
ACCGTGCTCC GGTCCTTCGC TCCGCAGCTC GTCCTCGGTC CCGACCCCAC GACGGTCTTC 
TACGGCGGAC GGCTCTACAA CCATCGTGAC CACCGCGAGC TCGGCTGGGC ACTCCTCGAC 
GCCGCCTTGC CGGCCGCGAG TCAGCCGGGT TACTTCCCCG AAGCGGGCGA GCCGATCGGA 
CCGCTCGAGG TCCTCCTTGC CGGTTCGGAG GAGCCCAACA GCGCGGTCGA CGTCTCGGCG 
TACCTCGAAC GCAAGGTGGA GGCGGTACGT CAATACCGGA GTCGCCTCGG CGCCGCCGAC 
GGCGTCCTCG CCGATGCGGT GGTCGGCCGT GCCGTGGACG CGGCGCGCAG CGTCGGCATT 
CCGGGCGCGG CGGAACTGTT TCGCAGGGTC GAGGGCGCAG GTTGA
 
Protein sequence
MTVEIYEPAA SVALACFAHP DDAEVLCGGT LARLAAQGAR VVLVVATRGD KGLARVDDAE 
ERRTGELLEA AAILAIADVV QLRYGDGDLS NDLELRRRLV TVLRSFAPQL VLGPDPTTVF 
YGGRLYNHRD HRELGWALLD AALPAASQPG YFPEAGEPIG PLEVLLAGSE EPNSAVDVSA 
YLERKVEAVR QYRSRLGAAD GVLADAVVGR AVDAARSVGI PGAAELFRRV EGAG