Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0676 |
Symbol | |
ID | 8322736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 682871 |
End bp | 683311 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951814 |
Product | PilT protein domain protein |
Protein accession | YP_003109302 |
Protein GI | 256371478 |
COG category | [R] General function prediction only |
COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC GCTTGCAGCG CTCGACGCCG CGAGGGACGA AGCACCGACG CGGCATGGCT GAGGCCGTCG TCGACGCATC CGCTCTGGTC GATCTTCTGC TGGACAATGA GCTCGGTCGT GCGGTGCGGC GTCGCATCGC TGGTCACGCC TTGCACGCAC CGGCGCACGT CGACGCAGAA GTCTTGTCGG CCCTGGGACG CCTGCATCGA GCAGACAGCC TCGATGCAGG CACCGTCGAG GTCAAGCTTC GCGAGCTGGC CGCAGCACCG ATCGAGCGGC ATCCCGTCCA CGATCTCCTC CTCGGGACCT GGGCCCGTCG CCAAGAGCTT CGGCTGGTCG ACGCGATCTA TATCGAACTG GCCGTCTCCC GCGGCGTACC GCTGGTGACG ACCGACCGCC GACTCCGCGG TGCACCATCG GTTGAGGTCG TGGCCACCTG A
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Protein sequence | MSARLQRSTP RGTKHRRGMA EAVVDASALV DLLLDNELGR AVRRRIAGHA LHAPAHVDAE VLSALGRLHR ADSLDAGTVE VKLRELAAAP IERHPVHDLL LGTWARRQEL RLVDAIYIEL AVSRGVPLVT TDRRLRGAPS VEVVAT
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