| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0654 |
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| Symbol | |
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| ID | 8322714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 663185 |
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| End bp | 664648 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951793 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_003109281 |
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| Protein GI | 256371457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCA GCTACGTAGT GCGCACCTTC GGGTGCCAGA TGAACGAGCA CGACTCCGAG
CGCATTGCGG GCGTGCTCGA GGGGCTCGGG CTGACGCGTG GCGACGATCC CGCGGACGCC
TCGGTCGTGG TCTTCAACAC CTGCACCATT CGGGCCAACG CCGACGAGCG TTTCTTCGGT
CAGGTGAACC AGCTGCGAGA GGCACGTCGT CGCAATCCGT CGATGCGCAT CGTGGTCGCC
GGGTGCTTGG CGCAAGGAGA AGGCGCAGGA CTGCTGGAGC GCGCGCCCCA CGTCGACGTG
ATCGTCGGCA CGCACCAGGT TGGCCGCCTC GCTGAGCTCC TCGGTGCAGC CGATGGGGCG
GAGGCGGTGG TGGACGTCCG TGAGCCCGAG CCGGGCAGCG TCGGTCTCGA CGACCCCACG
CCGTGGGGCG AGGCGGTGAG CGAGGAGCCC TGGCGAGCGT GGGTCACGAT CCAGGTGGGG
TGCGACAATC GCTGCGCGTT CTGCATCGTG CCGAGGGTGC GCGGACCGGA GGCCTCACGC
CCATTCGATG CGATCGTCGC CGAGGTGCGC GAACTGGCCG CACGGGGCGT GAGCGAGGTC
ACCTTGCTGG GTCAGAACGT GAACTCGTAC GGGCGCGATC TCGTGCTCGC GATGCGTCGG
GCCGAGGACG AGCGCGAGCG GGCTCAGGTT GCGAGTCGTT CGGGGGTCGC CTTCCTCGGC
CAGGGCGTGC CCAGGGTGCG TCCGCTGTTC GCGGATCTCG TGCGCGCGGT CGGGGCGGTG
CCAGGGATTC GGCGGGTTCG GTTCACGTCG CCGCACCCCA AGGACATGCG TACCGAGACC
TTCCAGGCCA TGGCCGAGAC CCCGACGGTG TGCGAGAGCC TGCACTTTCC GCTCCAGTCG
GGGTCGGATC GGATCCTTGC CGCCATGCAC CGCGGCTACA GTGCGGATCG CTTCCTCGCC
AAGCTCGCCG AGGCTCGTGC CACGATCGAC GATCTCGCCG TCTCGACCGA CATCATCGTC
GGCTTTCCGG GCGAGACAGA CGCCGACTTC GAGGCGACGC TCGAGGTCGC GGCCGAGGCG
GCGTTCGATC TCGCCTACAC GTTCATCTAC TCTCCCCGCC CGGGTACCGA GGCAGCGGCC
CTCGTCGATC GGTTCGTCGA CCCGGACGTG GTGCACGAGC GCTTCGACCG CTTGGTGCGC
GTCACGGAGC GCTCGGCGGC AGCGGCCCAT CGTGCCAGGG TCGGGCGAGA CGAAGAGATC
CTCATCGAAG GTCCGAGCCG CAAGGATCCC CGGACGGCCA CCGCGAGGAC GCGTCAGCAC
AAGCTCGTCC ACATTCCGGG GCTCGATGCG CGCGCGCTCG GGGGGCGCTA TGGGCGCGCG
AGGATCGTCG ACGCGCGGGC ACACTATCTG ATCGGCGAGA TCATCGACGT CGAGCCCGGG
GAGTCATCGC TCGTCGTGCC GTGA
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| Protein sequence | MPSSYVVRTF GCQMNEHDSE RIAGVLEGLG LTRGDDPADA SVVVFNTCTI RANADERFFG
QVNQLREARR RNPSMRIVVA GCLAQGEGAG LLERAPHVDV IVGTHQVGRL AELLGAADGA
EAVVDVREPE PGSVGLDDPT PWGEAVSEEP WRAWVTIQVG CDNRCAFCIV PRVRGPEASR
PFDAIVAEVR ELAARGVSEV TLLGQNVNSY GRDLVLAMRR AEDERERAQV ASRSGVAFLG
QGVPRVRPLF ADLVRAVGAV PGIRRVRFTS PHPKDMRTET FQAMAETPTV CESLHFPLQS
GSDRILAAMH RGYSADRFLA KLAEARATID DLAVSTDIIV GFPGETDADF EATLEVAAEA
AFDLAYTFIY SPRPGTEAAA LVDRFVDPDV VHERFDRLVR VTERSAAAAH RARVGRDEEI
LIEGPSRKDP RTATARTRQH KLVHIPGLDA RALGGRYGRA RIVDARAHYL IGEIIDVEPG
ESSLVVP
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