| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0653 |
|---|
| Symbol | |
|---|
| ID | 8322713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 662101 |
|---|
| End bp | 663141 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644951792 |
|---|
| Product | recA protein |
|---|
| Protein accession | YP_003109280 |
|---|
| Protein GI | 256371456 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCG ACAAGGCGCT CGAGACCGCC ATCGCACAGA TCGAGAAGCA GTTCGGCAAG
GGCTCCATCA TGCGCATGGG GGAGCACCCC GAGATGGCGA TCGAGTCCAT CCCGACCGGC
GCGATGGCGC TCGACCTCGC GCTCGGCGTG GGCGGACTGC CCCGTGGCCG GATCGTCGAG
ATCTACGGGC CGGAGAGCTC GGGCAAGTCG ACCCTCGCAC TCCACGTCGT CGCCGAAGCG
CAGCGTCAGG GAGGTCGGTG CGCCTACATC GACGCGGAGC ACGCACTCGA CCCGGTCTAT
GCCCAGGCCA TCGGTGTCGA CGTCGACCAG CTGCTCATCA GCCAGCCCGA CTACGGTGAG
CAGGCCCTCG AGATCGCGGA CCTGTTGATC CGTTCGGGTT CGATCGACGT CGTCATCGTC
GACTCGGTCG CCGCTCTGAC GCCCAAGGCC GAGATCGAGG GCGATATCGG CGATTCGCAC
GTCGGGCTCC AGGCGCGACT CATGTCGCAG GCGCTCCGCA AGCTCACCGC CAACCTCTCG
AAGACCAACA CGCTCGCGGT CTTCATCAAC CAGCTGCGCG AGAAGATCGG TGTGATGTAC
GGCTCGCCCG AGGTCACCCC GGGTGGTCGT GCGCTCAAGT TCTACAGCTC GGTGCGGCTC
GACATCCGGC GTGTGGAGTC CATCAAGGAC GGCGCGGAGA TCGTCGGCTC CCGTGCGCGG
GTGAAGGTGG TCAAGAACAA GTGTGCGCCG CCGTTCCGCC AGGCGGAGTT CGACATCGCC
TACGGCAAGG GGATCTCGCG CGAGGGATCG CTGCTGGACG TTGCGGTCGA GATGGGGCTC
GTGAAGAAGG CCGGAGCCTG GTACACCTAC GACGGTGAGC AGCTCGGCCA GGGGCGCGAG
AACGTCAAGG CCTTCCTCGC TGCGAACCCG CAGCTCATGG CCGAACTCGA CGTCAAGGTG
CGCGAGCGGG TGGCTGTGGA CCGTGGAGTC GCCCTGACGC ACGGCATCGT CGCCGAGGCC
GAGGCGATCA TCGAGGACTA G
|
|---|
| Protein sequence | MDRDKALETA IAQIEKQFGK GSIMRMGEHP EMAIESIPTG AMALDLALGV GGLPRGRIVE
IYGPESSGKS TLALHVVAEA QRQGGRCAYI DAEHALDPVY AQAIGVDVDQ LLISQPDYGE
QALEIADLLI RSGSIDVVIV DSVAALTPKA EIEGDIGDSH VGLQARLMSQ ALRKLTANLS
KTNTLAVFIN QLREKIGVMY GSPEVTPGGR ALKFYSSVRL DIRRVESIKD GAEIVGSRAR
VKVVKNKCAP PFRQAEFDIA YGKGISREGS LLDVAVEMGL VKKAGAWYTY DGEQLGQGRE
NVKAFLAANP QLMAELDVKV RERVAVDRGV ALTHGIVAEA EAIIED
|
|---|
| |