| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0632 |
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| Symbol | |
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| ID | 8322692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 637453 |
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| End bp | 638739 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951771 |
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| Product | peptidase M50 |
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| Protein accession | YP_003109259 |
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| Protein GI | 256371435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.39267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAGG AGATGGAGGC GCCAACCCTC CAGGAGGCTC GAAGCTTCTC CGGTCGCAGG
CTCGCCGAGC TCGTCGTCGT GCTCGTCGCC ATCATCGCGA TCGCCCAGCA CGCCCATGCA
CTCGGCACCC TCGCCGTCGT GGCGGCGATC GTCGCGATGG TCGTGCTGCA CGAACTTGGG
CACTACCTGG TCGCGCGGTG GTCGCGCATG GAGGTGACCG AGTTCTTCGT CGGGTTCGGG
CCGCGGATCT TCTCGTGGCA CCGCAAGGGG ATCGAGTACG GCCTGAAGGC GATCCTCGTC
GGTGGCTACG TCCGCATCAC CGGCATGACG AGCGCGGAAG AGGTCCCGCC CGAGCGTGAG
GCGCGCACCT ATCGCTCGTC GACCTTCCCC CGACGAGTCG CGGTCAGCGT GGCGGGCTCG
GTCATGCACT TCGTCGTGGC ATTTGGCATG CTGTGGTACC TGTTCAGTGG GGTCGGGACC
TACGCGAGTC GGGGCGTGGT CATCGAGGGG GTCGCACACA TCCCAGGGGT GGTGACCCCG
GCCGAGCGGA TCGGACTGCG TGCTGGCGAT ACGATCCTCG CCGTCGACGG GCATCGGAAC
CCTACCCTTG CTGCCTTCGC GTCGTCGATC TCTCACCATC CCGGCACCCC TGTGCGCCTC
GTTGTCGAGA CGCCCGGCGG TCGAGTCGTC TCGCGCACGG CGGTGCCGAT CCCCGCGACC
ATGGTGGCGA GATACGATGC GGCCTATCAC TCCCTGGGTT CCCAAGGCGT GCTCGGCGTG
GTGGTTGCGC CTCCAGTCGA ACGATCCAGT CTCGTCGGTG GGGTCGTGCC GTCGGCGCGC
GCGCTCTGGT CGCTCGCTGG TGCGAGCGTG AGTGGGCTCG TGTCGCACTT CACGCCCCAT
GGGATCGCGA CCTACGTGTC GGAGGTGACG CACCCCTCGG CGAACCCCAC CTCGGCAAAG
TCCGCGTCTC GCTTCGAGTC CCCCGTGGGG ATCGTGCAGC TCGCGTCCGA CGCGGTCGCG
GCCGGAACCG GCGCCGTGCT CGAGCTCCTC GTGCTGATCA ACGTCTTCGT CGGGATCTTC
AACATGGTGC CGTTGCTGCC GCTCGACGGC GGACACGTCG CCATCGCGAT CTACGAACGC
ATCCGATCGC GGCGAGGTCG TGCGTACCAC GCCGATGTCC TCAAGCTGAT GCCGATCACC
TACGCTGTGA TAGCGGTGAT CCTCTTTCTG GGTGTCACCG CGCTGTATCT GGACATCACG
CATCCGGTGC CCAACCCGTT CTCGTAG
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| Protein sequence | MAEEMEAPTL QEARSFSGRR LAELVVVLVA IIAIAQHAHA LGTLAVVAAI VAMVVLHELG
HYLVARWSRM EVTEFFVGFG PRIFSWHRKG IEYGLKAILV GGYVRITGMT SAEEVPPERE
ARTYRSSTFP RRVAVSVAGS VMHFVVAFGM LWYLFSGVGT YASRGVVIEG VAHIPGVVTP
AERIGLRAGD TILAVDGHRN PTLAAFASSI SHHPGTPVRL VVETPGGRVV SRTAVPIPAT
MVARYDAAYH SLGSQGVLGV VVAPPVERSS LVGGVVPSAR ALWSLAGASV SGLVSHFTPH
GIATYVSEVT HPSANPTSAK SASRFESPVG IVQLASDAVA AGTGAVLELL VLINVFVGIF
NMVPLLPLDG GHVAIAIYER IRSRRGRAYH ADVLKLMPIT YAVIAVILFL GVTALYLDIT
HPVPNPFS
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