| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0625 |
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| Symbol | |
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| ID | 8322685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 631123 |
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| End bp | 631887 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951764 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_003109252 |
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| Protein GI | 256371428 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.345068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACG ACGAGGTGAT CGAGTCGGCG TGGCGCCGCT TCAAGCACGA CGGTGACCTC
GAGGCGCGCA ATCGCCTGCT CGAGCACTAC GCGTCCCTCG TTCGCTTCGT CGCCTCGCGC
GTCGCGGTCG GGTTACCGGC GAGCGTCGAC CCCAACGACC TCGCCAGCTA CGGCACCTTC
GGGCTGATCG ACGCGCTCGA GAAGTTCGAG CCGGAGCGGG GCATCAAGTT CGAGACCTAT
GCCATCACAC GGATCAAGGG CGCCATCATC GACGAGCTTC GCGCGATCGA CTGGGTGCCG
CGGTCGGTGC GGGCCAAGGC GAAGTCGGTC GAGCAGGCCT ACGCCGCGCT CGAGGCACGG
CTGCATCGGC CCCCCACCGA TGCCGAGGTC GCCAGCGAGC TCGGCATGAG CGAGGACGAA
CTGCTGGCGA TCTACTCCAA GATCTCGTTC CTCGGACTCG TCGGTCTCGA CGAGGTGGTG
ATGTCGGGCG AGCGCGGTGA GGGTATGACG CTCGGGGACA CGCTTGCCGA TCGTCGTCAA
TCGGCCGGTG GCGCATTCGA GGAGCAGGAG CGCCGTCGCA TGCTCGCCGA TTCCATCAAT
CAGCTGGCCG ATCGCGAGAA GACCGTCCTC GTGCTCTACT ACTACGAAGG TTTCACCCTG
GCGGAGATCG GCCGGATCCT CGGCGTGACC GAGAGTCGGA TCTGTCAGAT CCACTCCAAG
GCCGTTCTGG CTCTGCGAGG CAAGCTCGGC GACCTGATCG GCTAG
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| Protein sequence | MSDDEVIESA WRRFKHDGDL EARNRLLEHY ASLVRFVASR VAVGLPASVD PNDLASYGTF
GLIDALEKFE PERGIKFETY AITRIKGAII DELRAIDWVP RSVRAKAKSV EQAYAALEAR
LHRPPTDAEV ASELGMSEDE LLAIYSKISF LGLVGLDEVV MSGERGEGMT LGDTLADRRQ
SAGGAFEEQE RRRMLADSIN QLADREKTVL VLYYYEGFTL AEIGRILGVT ESRICQIHSK
AVLALRGKLG DLIG
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