| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0622 |
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| Symbol | |
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| ID | 8322682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 627962 |
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| End bp | 629344 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951761 |
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| Product | Malate dehydrogenase (oxaloacetate- decarboxylating) |
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| Protein accession | YP_003109249 |
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| Protein GI | 256371425 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.295745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAC CGAGCGCGTC GTTCTCGGTG ACGGTGCGAG TCGAGCTCGA CGATCCTCGA
GGGATCGCCG AGGTGACCCG CGTTCTCACC GAGCGTGGTG CGGTGATCAC TGCGCTCGAC
ACGATCGAGT CGCGCGCGGG CCACCTCGTG GTCGACGTGA CCTGCAACGC GGTCGACGAG
GTCCATGCCG ACGAACTCCA CAAGGCGCTC GATGCCCTCG AGGGTACGAG GGTGCGCGCG
ATGAGCGATC GCACCCTCCT GCTCCACCTC GGTGGCGTCC TCCAAGTGGC CTCGAAAGTC
CCGCTTCGCA CGCGTGACGA CCTGTCGATG GCCTACACCC CGGGCGTGGC TCGAGTCTCG
GAGGCGATTC GCAACGATCC TGCTGCCGCG CGCAACCTCA CCATTCGGCG TAACGCCGTC
GCGGTCGTCA CGGACGGATC GGCGGTCCTC GGGCTCGGCA ACATTGGTCC GGCGGCTGCG
TTGCCGGTGA TGGAAGGCAA GGCGATCCTG TTCAAGCGCT TCGCCGACGT CGACGCTTGG
CCGCTCTGTC TCGCGACACA GGATCCGGAC GAGATCGTGC GGGCCGTCGA GATCATCGCC
CCGGTCTTCG GCGGCATCAA CCTCGAGGAC ATCGCCGCTC CGCGATGCTT CGAGATCGAG
CGCCGGCTTC GCGAGCGGCT CGATATCCCA GTGTTCCACG ACGACCAGCA CGGTACGGCG
ATCGTGGTGC TCGCGGCACT GCTGAACGCG TTGCGCGTCG TGGGCAAGCG GCTCGAGGAC
GTGCGGATCG TCATCGTCGG ACTCGGTGCG GCGGGGGTGG CGATCGCCCG ACTGCTGCTG
GCCGAGGGCG TGCGCGATCT CATCGCCGTC GACGTCGACG GCATCGTGAC TCCAGACGAT
CCCGGCCTCG ATCCGGCTCG ACGTGAGATC GCCGAGGCCT CGAATCCTCG CAACATCCGT
GGTGACCTCC CTGAGGCGAT GGAGGGTGCC GACGCCGTGA TCGGAGTCTC ACGACGCGGC
GTGCTGAAGG CGGAGCACCT CGAGCGCATG GCGCCGCGTT CGGTCGTGTT CGCCCTCGCC
AACCCTGAAC CAGAGGTGGA TCCAGAGATC GCGCGCCGCT TCGCCGAGGT CGTCGCGACC
GGTCGGAGCG ACGAGCCGAA CCAGATCAAC AATGTGCTCG TGTTCCCTGG CTTCTTCCGC
GGCCTCCTCG ACGCGAACGC GCGCGAGATC ACGCTCGCCA TGGAGCGAGC CGCCGCGCAC
GCGCTGGCGG CCATCGTGGC GCCCGACGAG CTCTCACCGG CCTACATCGT CCCAACGGTG
TTCAACCCGA GGGTGGCCCC CGCCATCGCG AAGGCGGTGG CCGGGGCGAT CACGGACAGC
TAA
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| Protein sequence | MPQPSASFSV TVRVELDDPR GIAEVTRVLT ERGAVITALD TIESRAGHLV VDVTCNAVDE
VHADELHKAL DALEGTRVRA MSDRTLLLHL GGVLQVASKV PLRTRDDLSM AYTPGVARVS
EAIRNDPAAA RNLTIRRNAV AVVTDGSAVL GLGNIGPAAA LPVMEGKAIL FKRFADVDAW
PLCLATQDPD EIVRAVEIIA PVFGGINLED IAAPRCFEIE RRLRERLDIP VFHDDQHGTA
IVVLAALLNA LRVVGKRLED VRIVIVGLGA AGVAIARLLL AEGVRDLIAV DVDGIVTPDD
PGLDPARREI AEASNPRNIR GDLPEAMEGA DAVIGVSRRG VLKAEHLERM APRSVVFALA
NPEPEVDPEI ARRFAEVVAT GRSDEPNQIN NVLVFPGFFR GLLDANAREI TLAMERAAAH
ALAAIVAPDE LSPAYIVPTV FNPRVAPAIA KAVAGAITDS
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