| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0598 |
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| Symbol | |
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| ID | 8322657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 603468 |
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| End bp | 605048 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951736 |
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| Product | Mur ligase middle domain protein |
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| Protein accession | YP_003109225 |
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| Protein GI | 256371401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.178011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAGCG TCGCCGGCAC TCTCGGAATC GTCATCGGGC TCGCCTCCTG GGTGGGGGCG
CTCCGGTGGC TCCGCGTCGC CCAACGCGAG CACTACATCC CGGGTCGCAT CTGGCTCTTC
GTGCGACTGT GGTTGCGTGA GTCCCCGGCG TCCATCGTCA TTGCGGTGGT CGGGTTCTTT
GGGGCGGTGT CTGCGTGGAG CTCGGCACTG CCGCGGATCC CTCACCTCAT CGCAGGAGCG
GTCGCGGCGG CCGCGAGCAT CGCGGCGCCG ATCGGCCTCG GTCTTCGCGG GCGCACGAGC
CCGTTGGCCC TCACCTGGCG CCTGCGTCGA CTGGCGCTCG TCGTCGTGAT GGTCGATCTC
GTCGTGGTCG GCGTCGGTAT CGCGGTTGGC GAGCCGCTCG GTGCGGCCGT GAGCGCCGGC
TGGCTCTCGC CGCTCCTCGT GGATCTCGCA CTGCGCATCA CCGCGCCGCT CGAGCGCAGG
CTGATGGGCC GCTTCGTCGA CGAGGCGACG TCTCGGCTCA GGCGTGTTCG CCCGCGCGTC
GTCGGTATCA CCGGATCGTT CGGCAAGACC ACGACGAAGG GCTACGTTGC GGCCCTCGTC
GAGGGGACGT ATCGCACGCT CGCGACGCCC GCGTCGTTCA ACAACCGCGG GGGTCTCGCT
CGCGCCATCA ATGAGCATCT CACATCCGAC GTCGAGGTCT TCGTTGCCGA GATGGGCATG
TTCGGACCCG GCGAGATCGC CGAGCTCGTC TCGTGGGTCA GGCCGGAGAT CAGTGTCATC
ACCGCCATCG GCCCGGTCCA CCTCGAACGG CTCGGATCCG AGGCGGCCAT CGTGCGAGCG
AAGCTCGAAA TCGTCGAGAC GGCTCGGGTG GTGGTGCTCA ACGTGGACTA TCCGCGCTTG
GCGCTGGCTG CGAACGCGCT GGAGCAGGAG GGCGCGAGGC GGGTCGTTCG GGTGTCGGCG
ATCTCGCTCG AGGCGGACGT CGCGGTCAAG CCCAACGACG AGGGCGAGGT CGTCGTCTAC
GCGCACGGCG CGAAGATCGC CAAGGCGGCG CTCGCCGACG TCGTGGCCGG CAACCTCGCC
TGCGCGGTCG CCGTCGCGCT CGAGCTGGGG GTGGCGCCGG AGGACATCGC CGAGCGGCTC
GGACGCATCA AGCCAGCGCC CAACCGGCTC GTCGCCGGCG TCTCGCCGAC CTCGGGCGTC
GAGGTCCTCG ACGACACCTA CAACGCGAAC CCGATGGGTG CGCGCCGGGC ACTCGATGCG
CTCGGCGCGC GCCGTGACGG TGGAGGGCGG CGCGTGGTAG TGACGCCGGG CATGATCGAG
CTCGGGCGCC GTCAGTACCT GGAGAACTTC AAGTTCGCCA AGGCCGCGGC TCAGGTTGCT
TCGCACATCA TCGTCGTCGG ACGCACCAAT CGACGAGCCC TCGAGGCCGG TGCCGACGAG
GGGCGGGACG AACCCGGCTC GACGCTCCAG GAGCTACGAT GGGCTCCCGA TCGGGAGCAT
GCGGTCGCGC TGGTCCGCGA GATGCTGGAG CCGGGCGACG TCGTCCTGTA CGAGAACGAC
CTTCCCGACC ACTACCCGTA G
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| Protein sequence | MSSVAGTLGI VIGLASWVGA LRWLRVAQRE HYIPGRIWLF VRLWLRESPA SIVIAVVGFF
GAVSAWSSAL PRIPHLIAGA VAAAASIAAP IGLGLRGRTS PLALTWRLRR LALVVVMVDL
VVVGVGIAVG EPLGAAVSAG WLSPLLVDLA LRITAPLERR LMGRFVDEAT SRLRRVRPRV
VGITGSFGKT TTKGYVAALV EGTYRTLATP ASFNNRGGLA RAINEHLTSD VEVFVAEMGM
FGPGEIAELV SWVRPEISVI TAIGPVHLER LGSEAAIVRA KLEIVETARV VVLNVDYPRL
ALAANALEQE GARRVVRVSA ISLEADVAVK PNDEGEVVVY AHGAKIAKAA LADVVAGNLA
CAVAVALELG VAPEDIAERL GRIKPAPNRL VAGVSPTSGV EVLDDTYNAN PMGARRALDA
LGARRDGGGR RVVVTPGMIE LGRRQYLENF KFAKAAAQVA SHIIVVGRTN RRALEAGADE
GRDEPGSTLQ ELRWAPDREH AVALVREMLE PGDVVLYEND LPDHYP
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