Gene Afer_0591 details

Gene Information

• Locus tag: Afer_0591
• ID: 8322650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 598595
• End bp: 599197
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644951729
• Product: Ribonuclease H
• Protein accession: YP_003109218
• Protein GI: 256371394
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.113002
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCACC AGCCATCGGG TGATCGGCTC GTCGGGATCG ACGAGGTGGG TCGCGGTGCC 
TGGGCCGGTC CCGTGGTCGT CGGTGCCGCG CGTGGATCGG TGGCAGCCGC CGCCGCCATC 
CTCGCGCATC CGCGCGGGGG GGTGCGCGAT TCGAAGGCCC TCTCGCCTGC GGCGCGCGAG 
GCGGCACTCG GCGCGCTCGA GGCGGCGGGT CTCGAGCTCA CGGTGGGTTC GGCGAGTGCT 
CGCGAGATCG ACAAGCTCGG ACTCACGGGG GCCTTGCGTC TTGCTGCGCA CCGTGCGCTC 
GGTGCAGCGA GCGAGCTCGA GGTCCTGCTG GATGGGCGTG TTCCCTACGT CGAGGCCGGT 
CGTGTGCACT GTATCGTCGG AGGGGATCGC CGCCACCCGC TCATCGCCGC AGCCTCGATC 
GTCGCGAAGG TGCGGCGTGA CGCGTTCATG GTGGCGCTGG ACGAGCTCGC TGCTGGCTAC 
GGATTCGCCC GTCACAAGGG CTATGGCACC GCCGAGCATC GGCGTGCGCT CTCAGAGCAC 
GGAGTGACAC CGTGGCATCG GCGCAGCTTC GGGCCGATCG GTGGGATGGT TGAGCACGGG 
TGA 

 

Protein sequence

MLHQPSGDRL VGIDEVGRGA WAGPVVVGAA RGSVAAAAAI LAHPRGGVRD SKALSPAARE 
AALGALEAAG LELTVGSASA REIDKLGLTG ALRLAAHRAL GAASELEVLL DGRVPYVEAG 
RVHCIVGGDR RHPLIAAASI VAKVRRDAFM VALDELAAGY GFARHKGYGT AEHRRALSEH 
GVTPWHRRSF GPIGGMVEHG