Gene Afer_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0590 
Symbol 
ID8322649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp597945 
End bp598565 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID644951728 
Productprotein of unknown function DUF121 
Protein accessionYP_003109217 
Protein GI256371393 
COG category[S] Function unknown 
COG ID[COG1920] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.304416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCAT CGGTCGTCGT CGTCATCCAG CGCTCCCTCG AGCGGGCGAA GTCCCGCCTC 
GCCGACACAC TCAGCCGCGA CGAGCGCAGA GCCTTCGTTC GCGCGTGCGT CACGCACATC 
GCGAGCGCCT CGCAGCCGGC CTCCGTCCTC GTCCTCGCCG AAGACCCGAG CGTCGAGGAG 
CTGGCCGCAG ACCTCGGGCT CGCGATCGAG CACCAACGTG GTCGCGAGCT GAACGCTGCC 
ATCGGCGAGA CCGTGGCGGG CCTCGACGGT CGCGTCCTCG TGGTCCCGGC CGACCTCCCG 
TTCTTCGCAC TCCCCACCGA CCTCGGCGAC GTCGGTGCCG TCGCACCCGA CCATCATCTC 
ACCGGGACCG TGGCGCTGTG GCTCCCCGAG CCAGCGGCCG CGTTCCCCTT CGCCTTTGGC 
CCCGATTCCC TCCGCCGACA CATGAGCGCG CTACGGGAGC GCTACGGACG CGTGCAGCTC 
CTCGGCACGC GCTTCCTGCT CGACATCGAC ACGGACGACG ACCTCGACCT CGCCCGGACC 
CTCACCGCGC TCGACCCAGC CCTCCACTGG CCGGACGCAC CGTGCCCGCC GATCGACCGC 
GCGAAGGCAC CATCGCCATG A
 
Protein sequence
MQPSVVVVIQ RSLERAKSRL ADTLSRDERR AFVRACVTHI ASASQPASVL VLAEDPSVEE 
LAADLGLAIE HQRGRELNAA IGETVAGLDG RVLVVPADLP FFALPTDLGD VGAVAPDHHL 
TGTVALWLPE PAAAFPFAFG PDSLRRHMSA LRERYGRVQL LGTRFLLDID TDDDLDLART 
LTALDPALHW PDAPCPPIDR AKAPSP