Gene Afer_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0554 
Symbol 
ID8322613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp556487 
End bp557377 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID644951693 
Productrestriction endonuclease 
Protein accessionYP_003109182 
Protein GI256371358 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA CGAACATCCC GCAGTATCAC GAGCTGATGT GGCCAGTGCT GACTGCTCTC 
AGGGAGCTGG GCGGGTCTGC CACGGTCAGG GAAATCTACG ACCGGGTCGT CGAAAACGAG
CATTTCTCCG AGGACCAGCA GGCTGAATCG ACCAAGGATG GTCGTATGTC TGAGATCGAG
TACCGCCTCC ATTGGGCGAG AACCCACCTG AAGGGAATCG GCGCGATCGA GAACAGCTCT
CGTGGTGTCT GGTCGTTGAC CGACAAGGGC CGGACGATCA CGCTGGACCA GATGAGGACC
GATACGAAGG CGTATCGAGA CGAGGTGCAG CGTCGGGCAA GACAGAAGCA GGCTTTGAAC
AGCGCAGCCG TAGAAACTGG TGATGAGGAG CCGGAGACCT GGAAGAATCA ACTTATCGAT
CGGCTCCTCC TCATCCCGCC GGACGGCTTC GAACGACTCG CTCAGCGACT GCTTCGTGAG
GCCGGATTTG TGAACGTAAC GGTTCTCGGC AAGAGCGGGG ACGGAGGCAT CGACGGTGTC
GGTGTGTACC GACTTTCCCT CGTCTCGTTT CCCGTCTACT TCCAGTGCAA GCGCTATAAA
GGAACCGTGA CGGCAGGTGC GGTCCGAGAC TTTCGGGGTG CCATGGCAGG CCGTGGAGAG
AAGGGTCTCC TGATCACGAC CGGCTCTTTC ACCAAGGACG CTCAGAACGA GGCCAGCCGT
GACGGAGCAC CCCCTGTCGA GCTGATCGAC GGGGATCGGC TCTGCGACCT CCTCCGTGAC
TACCGGCTCG GCGTGGACGT CCGGGAGCGC GTCGACCTTG AGATTGCGCT CGATTCCTCG
TTCTTTGACG AGTATGGCTC TACCGACGCT ACCAGCCCGA CCTCCGCTTG A
 
Protein sequence
MAATNIPQYH ELMWPVLTAL RELGGSATVR EIYDRVVENE HFSEDQQAES TKDGRMSEIE 
YRLHWARTHL KGIGAIENSS RGVWSLTDKG RTITLDQMRT DTKAYRDEVQ RRARQKQALN
SAAVETGDEE PETWKNQLID RLLLIPPDGF ERLAQRLLRE AGFVNVTVLG KSGDGGIDGV
GVYRLSLVSF PVYFQCKRYK GTVTAGAVRD FRGAMAGRGE KGLLITTGSF TKDAQNEASR
DGAPPVELID GDRLCDLLRD YRLGVDVRER VDLEIALDSS FFDEYGSTDA TSPTSA