Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0554 |
Symbol | |
ID | 8322613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 556487 |
End bp | 557377 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644951693 |
Product | restriction endonuclease |
Protein accession | YP_003109182 |
Protein GI | 256371358 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA CGAACATCCC GCAGTATCAC GAGCTGATGT GGCCAGTGCT GACTGCTCTC AGGGAGCTGG GCGGGTCTGC CACGGTCAGG GAAATCTACG ACCGGGTCGT CGAAAACGAG CATTTCTCCG AGGACCAGCA GGCTGAATCG ACCAAGGATG GTCGTATGTC TGAGATCGAG TACCGCCTCC ATTGGGCGAG AACCCACCTG AAGGGAATCG GCGCGATCGA GAACAGCTCT CGTGGTGTCT GGTCGTTGAC CGACAAGGGC CGGACGATCA CGCTGGACCA GATGAGGACC GATACGAAGG CGTATCGAGA CGAGGTGCAG CGTCGGGCAA GACAGAAGCA GGCTTTGAAC AGCGCAGCCG TAGAAACTGG TGATGAGGAG CCGGAGACCT GGAAGAATCA ACTTATCGAT CGGCTCCTCC TCATCCCGCC GGACGGCTTC GAACGACTCG CTCAGCGACT GCTTCGTGAG GCCGGATTTG TGAACGTAAC GGTTCTCGGC AAGAGCGGGG ACGGAGGCAT CGACGGTGTC GGTGTGTACC GACTTTCCCT CGTCTCGTTT CCCGTCTACT TCCAGTGCAA GCGCTATAAA GGAACCGTGA CGGCAGGTGC GGTCCGAGAC TTTCGGGGTG CCATGGCAGG CCGTGGAGAG AAGGGTCTCC TGATCACGAC CGGCTCTTTC ACCAAGGACG CTCAGAACGA GGCCAGCCGT GACGGAGCAC CCCCTGTCGA GCTGATCGAC GGGGATCGGC TCTGCGACCT CCTCCGTGAC TACCGGCTCG GCGTGGACGT CCGGGAGCGC GTCGACCTTG AGATTGCGCT CGATTCCTCG TTCTTTGACG AGTATGGCTC TACCGACGCT ACCAGCCCGA CCTCCGCTTG A
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Protein sequence | MAATNIPQYH ELMWPVLTAL RELGGSATVR EIYDRVVENE HFSEDQQAES TKDGRMSEIE YRLHWARTHL KGIGAIENSS RGVWSLTDKG RTITLDQMRT DTKAYRDEVQ RRARQKQALN SAAVETGDEE PETWKNQLID RLLLIPPDGF ERLAQRLLRE AGFVNVTVLG KSGDGGIDGV GVYRLSLVSF PVYFQCKRYK GTVTAGAVRD FRGAMAGRGE KGLLITTGSF TKDAQNEASR DGAPPVELID GDRLCDLLRD YRLGVDVRER VDLEIALDSS FFDEYGSTDA TSPTSA
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