| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0538 |
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| Symbol | |
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| ID | 8322597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 541983 |
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| End bp | 542882 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644951683 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_003109172 |
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| Protein GI | 256371348 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.404725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACGCA CTAGGTCGCT CGAGCTCGCG GTCGCGCTCG GGCTCGATGC GATGCTCGGT
GACCCGCCCG ACCGCTGGCA CCCGGTGGCC TGGTTCGGTC GGGCCGCGAG CGTGCTCGAG
CGACGCTACT GGCGTGACGA TCGTCGTGTC GGCGCGCTCG TGGCAGGTGC GCTCGTTGTG
GGTGGCACGC TGGTCGGCGC GGTGATCGAT CGCGTGCCTG GTGGGGCCCT AGCCAGTGCG
TGGGTCGCCC TCGGAGGGGC CGGGCTGCGG CGACGAGCGC TCGACGTCGC GCGTGCGTTG
GACGACGGTG ACCTCGAGCA GGCGCGTGCG TGGCTCGGCT GGCTCGTGGG TCGCGATCGC
GACGGGCTGG ACGCGACCGA GATCGCGCGC GCGACCATCG AGTCCGTGGC CGAGAACACG
GTGGATGCCG TGCTCGGCCC CATGGTCTGG CACGTCGCGC TCGGCTCGAT GGGCTCGATC
GCGCTGCGCG CCGTCAACAC CCTCGATGCG ATGGTCGGCC ATCGGAACGC TCGGTTCGAG
CGGTTCGGGT GGTTCGCAGC ACGCCTCGAC GATCTCGTCA TGGCGCCGCC ACGCCGGCTC
GCGATCGCGC TCGCGGCGCC GTCGCATCGC CGGCTCCTCC CGGCGGCTCG GTCGCACCCG
AGTCCGAACG CCGGGCCCAT GGAGGCGCTG GTGGCGGCCG CGGTCGGCGT GCGCCTCGGT
GGTGTCAACC GCTACGGGGA CGCGGTCGTC GAGCTCCCGG TGCTCGATGG CGGACCCCCG
CCCGACGCCG CAGCCATTCG GCGGGCGGTT CGGTGGTCGC GCAGCGTGAC ACTTGGCACG
CTCGCCTTTC TCGCCGTGGC CGAGCAGGCG GCGAACGCGG CGGTGGGCCG GGCCCCGTAG
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| Protein sequence | MRRTRSLELA VALGLDAMLG DPPDRWHPVA WFGRAASVLE RRYWRDDRRV GALVAGALVV
GGTLVGAVID RVPGGALASA WVALGGAGLR RRALDVARAL DDGDLEQARA WLGWLVGRDR
DGLDATEIAR ATIESVAENT VDAVLGPMVW HVALGSMGSI ALRAVNTLDA MVGHRNARFE
RFGWFAARLD DLVMAPPRRL AIALAAPSHR RLLPAARSHP SPNAGPMEAL VAAAVGVRLG
GVNRYGDAVV ELPVLDGGPP PDAAAIRRAV RWSRSVTLGT LAFLAVAEQA ANAAVGRAP
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