| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0532 |
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| Symbol | |
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| ID | 8322591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 535890 |
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| End bp | 536963 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951677 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_003109166 |
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| Protein GI | 256371342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGC TCGGTCTCGT GGGACTCGCC AACGCCGGCA AGTCCACACT CTTCAACGCC
CTCACCGGTC TCGACACCCC CGTCGCGCCC CACCCCTTCA CCACCACCGA CACCACCATC
GCCGAGGCGG TCGTACCCGA CGAGCGCGTC GACGCGCTCG CGGCGATCCA CCACTCGCGC
AAGCTGGTCT ATGCCCACAT GCAGCTCGCG GACATCGCCG GGCTCACCGC TGGGTCCTCC
CAAGGCGCCG GCCTCGGCAA TCGCTTCCTC GGCCAGCTGC GAGAGGCGGA CGCCATCCTC
TACGTGCTGC GCGCGTTCCA CGACGACCGA GTCCCGGGCG ACGACGACCC GATCGCGAAC
CTCGACGCCC TCGAGCTCGA GCTCACCCTC GCCGACCTCG CCAGCGTCGA GAGCGCGCTC
GAGCGGCGCC GCAAGGTCGC GCGGTCGGAC CCCTCGGCCC GACCCGAGGT GGCCGCCCTC
GAGGTCGTCC AAGCGGTCCT CGCAGACGGG ATCCCCCTCT ATCGGGCCAC CCTCGAGACC
GACGTGCTCG AGCTGGTCCG CTCGGCCTTT CTCATCACGA CCAAACCCGC CATCGCGGTG
ATCAACGCCG ACGAGGGTGC CGAGGCCGAC GTGGCCGTCG AGGACACCGT GCGAGGGCGC
CTCGGCGATC ACGCCACCGT CGTCACCGCA CCGCTCGCGC TCGAGGCGGA GCTCGCCAGG
CTCGAGCCTG CCGAACGTGC CGAGATGATG GAGGCCCTCG CCATCGGTTC GAGCGCCCTC
GAGCGCATCG CTCGAGCCGC CTTCGAAACC CTGGAGCGCT GGACCTTCTT CACGAGCGGC
GACAAGGACA CCCACGCGTG GACCTTCCGA CGCGGCTCGA ACGCCCAGAC CTGCGCGGGC
ATCATCCACT CCGATCTCGC CCGCGGCTTC ATCCGCGCCG AGGTGGCCTC CTGGCGCGAC
GTGGTCGAGG CGGGCTCGTG GACCCGGGCC AAGGCGCAGA ACAAGGTCCG GCTCGAAGGG
CGCGACTATC TCGTCGCCGA CGGCGACGTG CTCGAGATCC GCTTCAACGT GTGA
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| Protein sequence | MDKLGLVGLA NAGKSTLFNA LTGLDTPVAP HPFTTTDTTI AEAVVPDERV DALAAIHHSR
KLVYAHMQLA DIAGLTAGSS QGAGLGNRFL GQLREADAIL YVLRAFHDDR VPGDDDPIAN
LDALELELTL ADLASVESAL ERRRKVARSD PSARPEVAAL EVVQAVLADG IPLYRATLET
DVLELVRSAF LITTKPAIAV INADEGAEAD VAVEDTVRGR LGDHATVVTA PLALEAELAR
LEPAERAEMM EALAIGSSAL ERIARAAFET LERWTFFTSG DKDTHAWTFR RGSNAQTCAG
IIHSDLARGF IRAEVASWRD VVEAGSWTRA KAQNKVRLEG RDYLVADGDV LEIRFNV
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