| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0507 |
|---|
| Symbol | |
|---|
| ID | 8322566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 510920 |
|---|
| End bp | 511795 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644951658 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003109147 |
|---|
| Protein GI | 256371323 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT TCTTACTGAC CCTGGGCTTT GGGATCGTGA CTTCGGCGGT GCTGGCGCTC
GCTGCGGTAG GCCTCAGCTT GCAGTTCGGA GTCACGAACT ACGTCAACTT TGCCTACGGA
GCCTATCTCG CAGTGGGAAT GTTCGTGACC TACACTGCGT CGGTCGGCCT GCACTTGCCC
TTCTGGCTCG GCGGCTTGGT CGGGGTGATC GCCAGTGGGC TTGCGGCTGT GGCGGTCGAT
GTCGCCGTGC TCGAGCCTTT CGTCCGTCGA GGCACGAGTG GCTTCTTCCT CTTGATCGTG
ACGTTCGGCC TCTCGCTCAT CCTACTGAAC CTGGTGCAGG CAATCTGGGG GGTTGGGTTC
GATCGCTACC CCATCGCAGC AGGCAATCCC CTGCACCTCG GTCCTTTCAG CTTGACCGCC
GCCCAGATCG GGGTCGTCAT CGTCGCCGCC GTGGTGATGG TCGGGGTCCA CCTGCTGCTG
ACGCGCACGC GACTCGGCAT GGCGATGCGG GCGATGTCGG ACAACGCGCC GCTCGCCGCC
GCGAGCGGCA TTGACACGCG CCGCACCACA CGCTGGACAT GGTTCCTGAG TGGTGCGCTC
GCAGGACTGG GGGGCATCAC GCTCGCACTC AACACGGTCG AGTTTCAAGC CTTCACCGGC
AACACCTTCC TGTTCGTGAT CTTCGCCGCG GTCATCCTCG GCGGTATCGG CAAGATCTAC
GGCGCCATGG TGGGCGCACT CGTGATCGGG CTCGCCATCA GCCTCTCGAC GCTCGTGATC
TCTGCTGCCT ACAGCCTGGA CGTCGCCTTC TTGGTGCTGG TCTTGACACT GCTCATTCGG
CCGCAGGGGA TCTTCGCGAC CGCTGGAAAG GCTTAG
|
|---|
| Protein sequence | MSLFLLTLGF GIVTSAVLAL AAVGLSLQFG VTNYVNFAYG AYLAVGMFVT YTASVGLHLP
FWLGGLVGVI ASGLAAVAVD VAVLEPFVRR GTSGFFLLIV TFGLSLILLN LVQAIWGVGF
DRYPIAAGNP LHLGPFSLTA AQIGVVIVAA VVMVGVHLLL TRTRLGMAMR AMSDNAPLAA
ASGIDTRRTT RWTWFLSGAL AGLGGITLAL NTVEFQAFTG NTFLFVIFAA VILGGIGKIY
GAMVGALVIG LAISLSTLVI SAAYSLDVAF LVLVLTLLIR PQGIFATAGK A
|
|---|
| |