Gene Afer_0483 details

Gene Information

• Locus tag: Afer_0483
• ID: 8322542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 484684
• End bp: 485247
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644951634
• Product: intracellular protease, PfpI family
• Protein accession: YP_003109123
• Protein GI: 256371299
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase
• TIGRFAM ID: [TIGR01382] intracellular protease, PfpI family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGAAGG TGCTCATCCT GACCGGCGAC GCTGCGGAGT CTCTCGAGGT CTTGTATCCC 
TACCAGCGAC TGCTCGAGGA GGGCTACGAG GTCGATATCG CGGCACCGTC GAAGAAGAAG 
CTCCGCTTCG TGGTGCACGA TTTCGAGGAG GGCTTCGATA CCTACACGGA GAAGCCGGGC 
TACTCGTGGC CTGCAGACCT GAGCTTTGCG GAGGTCGACC CCACGGCCTA TGTCGCGTTG 
GTCATCCCGG GCGGTCGGGC CCCGGAGTAC ATCCGCAACG ACCCCGATTT CGTCCGGATC 
GTCCGCCACT TCTTCGAGGC TGACCAGCCC GTCGCGCAGC TCTGCCACGC GCCGATCGCG 
CTCGCTGCCG CCGGCGTGCT GCAGGGGCGG CGGTCGGCTG CTTATCCAGC GCTTGCACCG 
GACGTGCGCG CTGCGGACGC CGAGTTCGTG GATGCGGCGG CGGTGGTGGA TGGGCAGATG 
GTGTCGGCGC GCGCGTGGCC GGATCATCCG AGCTGGATGC GGGCCTTCAT CGGGATCCTC 
CGCGAGAAGG CTCCGGTCGG CTGA 

 

Protein sequence

MPKVLILTGD AAESLEVLYP YQRLLEEGYE VDIAAPSKKK LRFVVHDFEE GFDTYTEKPG 
YSWPADLSFA EVDPTAYVAL VIPGGRAPEY IRNDPDFVRI VRHFFEADQP VAQLCHAPIA 
LAAAGVLQGR RSAAYPALAP DVRAADAEFV DAAAVVDGQM VSARAWPDHP SWMRAFIGIL 
REKAPVG