Gene Afer_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0478 
Symbol 
ID8322537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp480859 
End bp481488 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID644951629 
Productprotein of unknown function DUF159 
Protein accessionYP_003109118 
Protein GI256371294 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCC GTTTCGACCA GCGGTTCGGG CCGGAGCGCC TCGCGCGAGC GATCGCCGAG 
CTTGCGACGC CGCTCGGCGC TGAATCGGCG ACGCCGTCGG GCATCGCGTC CCGCGGCGTC 
GTCGTGCCGT CGGACGGCGC GATCGTCGTC CGTATGAGCC CCTCGCTCGA GGTCGGTGAG 
CTCACCTTCG GCGTGAGGAC GCGGGCCGGC TCGCTCGTCA TCAATGCGCG TCGTGAGACG 
CTCGGCGAGC GGCCGCTGTT TCGCGGTGCG CTGTCGGGGG GCCGCTGTGT GGTGCCGATC 
AGGGGGTTCT ACGAGTTCAC CGGGCCGCGC GGTGCGCGCT CGCCGGTGTT CTTCCACTGG 
AATGGCGAGC TGCACTGGCT CTGCGGCCTC GCCGTCGGCG AGGGACTCGT CGTCGTGACC 
GAGCCTGCTG GCGGGCCCGT CGCCGGGTGG CACGATCGCG AGCCTGTCGT GCTCGATCAC 
CTGGGCGGCG CCGCGTGGCT CCGCGACGGC GAACTCGCCA CGGGCGGTGC ACACGACGCC 
GAGGTCATCG TGCTCGATCG CTCGTGGACG TCGCCACGTG GCGATCGCGA CCCGTTGGCG 
TTCGGGGGGC CTAGGCCGGA TCCGACGTGA
 
Protein sequence
MCGRFDQRFG PERLARAIAE LATPLGAESA TPSGIASRGV VVPSDGAIVV RMSPSLEVGE 
LTFGVRTRAG SLVINARRET LGERPLFRGA LSGGRCVVPI RGFYEFTGPR GARSPVFFHW 
NGELHWLCGL AVGEGLVVVT EPAGGPVAGW HDREPVVLDH LGGAAWLRDG ELATGGAHDA 
EVIVLDRSWT SPRGDRDPLA FGGPRPDPT