Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0472 |
Symbol | |
ID | 8322531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 473643 |
End bp | 475022 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644951623 |
Product | peptidase U62 modulator of DNA gyrase |
Protein accession | YP_003109112 |
Protein GI | 256371288 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.347411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGATC CGGAGCTGGT GGACCTCGTG CTCCAGCGCG CGCTCGCCCG TGGGGGCGAC TTCGCCGAGG TGTTCGTCGA AGAAGTGCGC TCGACCTCGG TGAGCGTCGA CGACGGGCGG GTCGGCGCCC TGGCCGACGT TGGATGGCGT GGGGTCGGGA TCCGCGTCGT CGTCGGCGAG ACGACCGGCT TTGCCCACAC CACCGACCTG TCGCCTCGCG CGCTCGTCGC GGCGGCCGAG ACCGCCTCGT CGATCGCGAA GGGAGGCGCG AGTCGGGTCG CTCCCCTCGA GGTAGCACCC ATCGAGCCTG CGGCGCCCGA GCGCGACCCG AGCGCCAAGC GGCGCATGGT GGAGCTGCTG CGCGCTGGTG AGACGGAGGC GCGAGGGCTC GCCGATGCGA TCGTCCAGGT GTCCGGCCAG GCCGCGACCG CGCGGCGTCG GATCCTCGTG GCCAACTCCG AGGGCCGATT CGTCACCGAT CGGCAGGCAC GCACGCGTGT GTCGTTCCAG GTCGTGGCCG CCGGGGACAC CGGGGCCCAG AGTGGGCGCG AGACGTCTGC GGCCACCGTC GATCTCGAGG AGTTGCTCGA CGCCCTCGAC GTCGGCGCCC TCGCGCAGGT CGCTGGACGA CGGGCGCTTG CCAAACTGGC GGCGCGTCCC GCTCCAGCAG GCGTTCTGCC GGTGGTGCTG GCGAAGGGGT CGGGCGGCAT CTTGTTCCAC GAGGCCTGCG GCCACGGCCT CGAGGCCGAC CACATCGCCA AGGGCGCCTC CGTGTACGCA GGCCGTCTCG GTGAGCGGGT GGCGAGCCCG CTCGTGACGC TCGTCGACGA CGGGACCCGG GCCGGGGAGT GGGGGAGCTA CCACATCGAC GACGAGGGCA ACCCTGCCCA GTCGAACGTG CTGATCCGCG ATGGTGAGCT CGTCGACTAC CTCTGGGATC GCCGCAGCGC CACGAAGCTC GGCCAGAGCC CGCGTGGCAA CGGTCGGCGC CAGGACTATC GATCCCTGCC GATGGTGCGC ATGACGAACA CCTTCCTCAC CCCGGGGGAG AGCGATCCAG CAGACGTGGT TGCGAGCACC GACCACGGCG TCTACGTGGC CGCCCTCTCC GGCGGTCAGG TCAACACGGC CACCGGAGAC TTCGTCTTCG GGGTGCAGGA GGCCTACCTC ATCGAGCACG GCCGCATCAC CGCTCCCATT CGCGACACCC AGCTCATCGG GAATGGCCCC GAGGTGCTCG CTGCCGTGGA TGCGGTCGCG AACGACTTCG ACATGACCGC GGGGACCTGT GGCAAGAACG GTCAGTCCGT TCCGGTCGGG TGCGGCCAGC CGACGCTGCG ACTGGCCGGT GTGACGCTCG GGGGAACGAT CGGTGGCTGA
|
Protein sequence | MIDPELVDLV LQRALARGGD FAEVFVEEVR STSVSVDDGR VGALADVGWR GVGIRVVVGE TTGFAHTTDL SPRALVAAAE TASSIAKGGA SRVAPLEVAP IEPAAPERDP SAKRRMVELL RAGETEARGL ADAIVQVSGQ AATARRRILV ANSEGRFVTD RQARTRVSFQ VVAAGDTGAQ SGRETSAATV DLEELLDALD VGALAQVAGR RALAKLAARP APAGVLPVVL AKGSGGILFH EACGHGLEAD HIAKGASVYA GRLGERVASP LVTLVDDGTR AGEWGSYHID DEGNPAQSNV LIRDGELVDY LWDRRSATKL GQSPRGNGRR QDYRSLPMVR MTNTFLTPGE SDPADVVAST DHGVYVAALS GGQVNTATGD FVFGVQEAYL IEHGRITAPI RDTQLIGNGP EVLAAVDAVA NDFDMTAGTC GKNGQSVPVG CGQPTLRLAG VTLGGTIGG
|
| |