Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0471 |
Symbol | |
ID | 8322530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 472422 |
End bp | 473510 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951622 |
Product | Polyprenyl synthetase |
Protein accession | YP_003109111 |
Protein GI | 256371287 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.25272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGACG AATCGAGCGC GGTGGTGGAG CCGTGCGTCG CAGAACCGGA GGTCCTCGGA GCCCCCACAC GCCTGGTCGA GGCACGCCTC GGCCATCTGC TCGACGCAGA GGCGGCACGC TGGCGCGCCA TCGACGAACG CTTCGCCGAA CCGTTCGATG AGCTGTCACG CCTCACGCGT GCGGGCGGCA AGCGCCTCCG CCCCGCCCTT GCGTTCTGGG CCGCGCGTGG GCTCGGTGTG GACGGCGACG ACGAGCTCCT CGGTGACCTG CTGGTGGCGA TCGAGCTCCT CCACACCTTC GCGCTCGTGC ACGACGACAT CATGGATCGC TCCGAACTTC GCCGCGGTGC TGTGACCGTT CATGCGCGCG CGCGCGACGA GCACCGCTCC CTCAAGCTCC GCGGTGAGGC CGAGACCTAC GGGGATGCGA TCGGCATCTT GGTCGGGGAC TTGGCCCTCA CGCTTGCCGA CGGCGCCCTC GAGGCGGCCC CGCTCCCGGT GCGTGCCACG TTCACACAGC TCAAGCTCGA GGTCAATCTC GGCCAGTACC TCGACGTGGT CGCGAGCGCC CAGCTCTTCG ACACCCCGGA GCACGCCGAG CACATCGCCC TGTTCAAGTC GGCCAAGTAC ACCGTGGAGC GACCGCTGCA TCTCGGCGCG CTGCTGGCGG ATCCGGCCGA CGGGGTGCTC GCGGCGCTCT CGCGCTTCGC ACTCCCCTTG GGGCTCGCGT TTCAGCTGCG TGACGACGTC CTCGGCGTCT TCGGCGACGG TGCTCGCACC CGCAAGCCGG TCGGCGACGA CCTACGCGAA GGGAAGTGGA CCCTGCTGGT TGCCGAGACC CGAGAGCGGC TCGACGTCGC CGATCTCGTC CGCTTCGACG AGGCGCTCGG GGATGCGAAC CTCGAAGGCC GTGCGCTCGA CGACGTGCTC GGCCTCGTCC GTCGTAGCGG TGCCCTCGAT CGGGTCGAGC AACGCATCGA CGAGCTTGCC GACCAGGCGA TGGATGCCCT CGGCGACCTC CCGCTCTCCG CTGAGGCGCG CTGCGCGCTC GGGGACCTCG CGACCTTCAT CGTCGCCCGT CAGCACTGA
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Protein sequence | MDDESSAVVE PCVAEPEVLG APTRLVEARL GHLLDAEAAR WRAIDERFAE PFDELSRLTR AGGKRLRPAL AFWAARGLGV DGDDELLGDL LVAIELLHTF ALVHDDIMDR SELRRGAVTV HARARDEHRS LKLRGEAETY GDAIGILVGD LALTLADGAL EAAPLPVRAT FTQLKLEVNL GQYLDVVASA QLFDTPEHAE HIALFKSAKY TVERPLHLGA LLADPADGVL AALSRFALPL GLAFQLRDDV LGVFGDGART RKPVGDDLRE GKWTLLVAET RERLDVADLV RFDEALGDAN LEGRALDDVL GLVRRSGALD RVEQRIDELA DQAMDALGDL PLSAEARCAL GDLATFIVAR QH
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