Gene Afer_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0471 
Symbol 
ID8322530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp472422 
End bp473510 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID644951622 
ProductPolyprenyl synthetase 
Protein accessionYP_003109111 
Protein GI256371287 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.25272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGACG AATCGAGCGC GGTGGTGGAG CCGTGCGTCG CAGAACCGGA GGTCCTCGGA 
GCCCCCACAC GCCTGGTCGA GGCACGCCTC GGCCATCTGC TCGACGCAGA GGCGGCACGC
TGGCGCGCCA TCGACGAACG CTTCGCCGAA CCGTTCGATG AGCTGTCACG CCTCACGCGT
GCGGGCGGCA AGCGCCTCCG CCCCGCCCTT GCGTTCTGGG CCGCGCGTGG GCTCGGTGTG
GACGGCGACG ACGAGCTCCT CGGTGACCTG CTGGTGGCGA TCGAGCTCCT CCACACCTTC
GCGCTCGTGC ACGACGACAT CATGGATCGC TCCGAACTTC GCCGCGGTGC TGTGACCGTT
CATGCGCGCG CGCGCGACGA GCACCGCTCC CTCAAGCTCC GCGGTGAGGC CGAGACCTAC
GGGGATGCGA TCGGCATCTT GGTCGGGGAC TTGGCCCTCA CGCTTGCCGA CGGCGCCCTC
GAGGCGGCCC CGCTCCCGGT GCGTGCCACG TTCACACAGC TCAAGCTCGA GGTCAATCTC
GGCCAGTACC TCGACGTGGT CGCGAGCGCC CAGCTCTTCG ACACCCCGGA GCACGCCGAG
CACATCGCCC TGTTCAAGTC GGCCAAGTAC ACCGTGGAGC GACCGCTGCA TCTCGGCGCG
CTGCTGGCGG ATCCGGCCGA CGGGGTGCTC GCGGCGCTCT CGCGCTTCGC ACTCCCCTTG
GGGCTCGCGT TTCAGCTGCG TGACGACGTC CTCGGCGTCT TCGGCGACGG TGCTCGCACC
CGCAAGCCGG TCGGCGACGA CCTACGCGAA GGGAAGTGGA CCCTGCTGGT TGCCGAGACC
CGAGAGCGGC TCGACGTCGC CGATCTCGTC CGCTTCGACG AGGCGCTCGG GGATGCGAAC
CTCGAAGGCC GTGCGCTCGA CGACGTGCTC GGCCTCGTCC GTCGTAGCGG TGCCCTCGAT
CGGGTCGAGC AACGCATCGA CGAGCTTGCC GACCAGGCGA TGGATGCCCT CGGCGACCTC
CCGCTCTCCG CTGAGGCGCG CTGCGCGCTC GGGGACCTCG CGACCTTCAT CGTCGCCCGT
CAGCACTGA
 
Protein sequence
MDDESSAVVE PCVAEPEVLG APTRLVEARL GHLLDAEAAR WRAIDERFAE PFDELSRLTR 
AGGKRLRPAL AFWAARGLGV DGDDELLGDL LVAIELLHTF ALVHDDIMDR SELRRGAVTV
HARARDEHRS LKLRGEAETY GDAIGILVGD LALTLADGAL EAAPLPVRAT FTQLKLEVNL
GQYLDVVASA QLFDTPEHAE HIALFKSAKY TVERPLHLGA LLADPADGVL AALSRFALPL
GLAFQLRDDV LGVFGDGART RKPVGDDLRE GKWTLLVAET RERLDVADLV RFDEALGDAN
LEGRALDDVL GLVRRSGALD RVEQRIDELA DQAMDALGDL PLSAEARCAL GDLATFIVAR
QH