| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0438 |
|---|
| Symbol | |
|---|
| ID | 8322497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 438075 |
|---|
| End bp | 438644 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644951590 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_003109079 |
|---|
| Protein GI | 256371255 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGC CTGAGCTCGA GGCGCTCGAG GCCGAGGTTC GCGCGTGCCA CGCCTGTCGC
TTGTCCGCGG GTCGTCATCA GGCGGTGCCC GGCGAGGGCG CCGCGCCCGC ACCACTGCTC
GTCGTCGGCG AGGGTCCGGG GGCGCGCGAG GACGAACTCG GGCGCCCCTT CGTCGGGCGC
TCGGGGCAGC TGCTCGATGC CCTGTTGGCT GATGAGACCG GCCTCGATCG GAGCGGCCTC
TACATCGCCA ACACCGTCAA GTGTCGCCCC CCGGGCAATC GCACGCCGAG GCCGGACGAG
GTCGAGGCGT GCAGGGGCTT CCTTGCGCGC CAGATCCACC TGGTCGATCC GGTCGTGATC
GTCGCGCTGG GCCAGAGCGC AGCGGCGTGG TTCCTCGGAC CCGGCGCCCG CGTCGGCGCG
CTCCGTGGCC AGGTGCTCGA GTGGGAAGGA CGAGCGCTCG TCGTCACCTA TCACCCATCG
GCGGCGCTGC GCGGCGGTGC GGCCATCGTC GCCGCACTGC GCAGCGATCT CGCCCGCGCC
AGCGTGGCAC TCGCGGAGCG ACGTCGATGA
|
|---|
| Protein sequence | MGLPELEALE AEVRACHACR LSAGRHQAVP GEGAAPAPLL VVGEGPGARE DELGRPFVGR
SGQLLDALLA DETGLDRSGL YIANTVKCRP PGNRTPRPDE VEACRGFLAR QIHLVDPVVI
VALGQSAAAW FLGPGARVGA LRGQVLEWEG RALVVTYHPS AALRGGAAIV AALRSDLARA
SVALAERRR
|
|---|
| |